Gene Mjls_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4938 
Symbol 
ID4880637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5179410 
End bp5180063 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID640142248 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001073194 
Protein GI126437503 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.248634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGA CCCATTTCGG CCATTCGTGC CTACTCGCGA GCTTTTCGGA CGGTTCCGCG 
TCTGAGACAA CGGTTTTGTT CGATCCAGGC ACGTTCTCGC ACGGATTCGA GGGCATCACC
GGTCTGTCGG CGATCCTGAT CACCCATCAG CATCCCGACC ACGCCGACGT CAACCGCCTA
CCGGCGCTGC TCGACGCGAA TCCGCAGGCC GCGCTGTACT GCGATCCGCA GACCGCACAA
CAACTCGGCG GCTCGTGGCG CGCGGTGCAC GCGGGCGACG CGTTCACCGT CGGCCACCTG
ACCGTCCGCG GGGTAGGCGG CCACCACGCG ATCATCCACC CCGAACTGCC CGAGATCGAC
AACATCTCGT ATCTGATCGG CGACGGTGAT CATCCGGCCC GGCTCATGCA CCCCGGCGAC
GCGCTGTTCG AGCCCGGTGA ACCGGTCGAC GTGCTGGCGG CGCCGGCGGC GGCGCCCTGG
ATGAAGATCT CCGAGGCCGT CGAGTACCTG AGGGCCGTCG CACCGGCCCA CGCGGTGCCG
ATCCACCAGG GCATCATCGA CCCGAGCGCC CGCGGGATCT TCTACGGGCG CTTGAGCGAG
ATGACCGACA CCGACTTCCA GGTCCTCGAC GAGGAGAACT GCACCGAGTT CTAG
 
Protein sequence
MQLTHFGHSC LLASFSDGSA SETTVLFDPG TFSHGFEGIT GLSAILITHQ HPDHADVNRL 
PALLDANPQA ALYCDPQTAQ QLGGSWRAVH AGDAFTVGHL TVRGVGGHHA IIHPELPEID
NISYLIGDGD HPARLMHPGD ALFEPGEPVD VLAAPAAAPW MKISEAVEYL RAVAPAHAVP
IHQGIIDPSA RGIFYGRLSE MTDTDFQVLD EENCTEF