Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4926 |
Symbol | |
ID | 4880625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5164153 |
End bp | 5165352 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640142236 |
Product | virulence factor Mce family protein |
Protein accession | YP_001073182 |
Protein GI | 126437491 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.222093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCAGCC ACCGCCGTCA CCCGCCGTAC CGGCTGGCCG GCGCGGTTGC GCTCGCGGTG TTCTGCGTTG TGGCGGCAAC CATTTCGCTA CAGTTCCGCG GCGCCTTCGC CGAGCGGGTG ACACTCACCC TGTTGTCCCC CCGGGCCGGG CTGGTGGTGG ACCCGGGAGC GAAGGTGACG TTCAACGGGG TGGAGATCGG ACGGGTGACC GCGATCTCCG CCCGAGCCGA CGAGACCGCA CCGGCAGAGT TGGCCCTGTC GGTCGACCCG CGCCATCTGC ACGTCATCCC GGCCAATGTG ATCGCCGACA TCAGGGCCAG CACAGTCTTC GGCAACAAGT ACGTTGCGCT CCGGTCACCG GATCACCCTG CGCGCGAACC GATCTCACCG GACCTCCCGA TCCGGTCGGT GGCGGTCACC ACCGAGTTCA ACACGTTGTT CGAGACGGTC GTGAGCCTGG CCGAGCGGGT GGACCCGGTC AAGCTCAACC AGACCCTCGC CGCCACCGCC GAGGCACTCA CCGGGCTGGG TGCACGCTTC GGCGAATCGC TGGAACACGG AGCCGCGATC CTGGCGGACC TCAATCCGCG GATGGATCAG GTGCGCCACG ACGTGGCGCG CACCGCCGAT CTGGCAGGCA TCTACGCCGA CGCCTCCCCC GACCTGTGGT CGGCGCTGGA CCACGCCGCG CTCACCGCGG CGACGGTGAA CGCCCGTCGT TCCGACGTCG ACGCCGCGCT GCTGGCGGCG GCCGGTTTCG AGGCGGGCGC CGACACGCTG CGGCGCGCCG GGCCGTACCT GGTGCGCGGT AGTGCCGACC TGCAGCCCAC CACCGCACTG CTCGACGACT ACCGGGGCAT GATCTTCTGC ACGATCCGCA ACTACCACGA CGTCGCACCG GAGATCCAGC GCACGCTCGG CGGAGACAAC GGCTACGCGC TGCGCGCGGC GGGCACCGTG CTCGGCGCCG GCAATCCCTA TGTGTATCCC GACAATCTGC CGCGAATCAA CGCCCGCGGC GGACCCGGCG GCAGGCCGGG CTGCTGGCAG AAGGTCACCC GCGAGCTGTG GCCGCATCCG TATCTGGTGA TGGACACCGG CTACAGCCTG GCCCCGTACA ACCACGCCGA GTTCGGCCAA CCGTTCGCGA TGGACTACGT GTGGGGCCGC CAACTCGGCG AGCTCACCAT CAATCCCTGA
|
Protein sequence | MASHRRHPPY RLAGAVALAV FCVVAATISL QFRGAFAERV TLTLLSPRAG LVVDPGAKVT FNGVEIGRVT AISARADETA PAELALSVDP RHLHVIPANV IADIRASTVF GNKYVALRSP DHPAREPISP DLPIRSVAVT TEFNTLFETV VSLAERVDPV KLNQTLAATA EALTGLGARF GESLEHGAAI LADLNPRMDQ VRHDVARTAD LAGIYADASP DLWSALDHAA LTAATVNARR SDVDAALLAA AGFEAGADTL RRAGPYLVRG SADLQPTTAL LDDYRGMIFC TIRNYHDVAP EIQRTLGGDN GYALRAAGTV LGAGNPYVYP DNLPRINARG GPGGRPGCWQ KVTRELWPHP YLVMDTGYSL APYNHAEFGQ PFAMDYVWGR QLGELTINP
|
| |