Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4839 |
Symbol | |
ID | 4880538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 5088189 |
End bp | 5088836 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640142145 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001073095 |
Protein GI | 126437404 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0941729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGATC TCGACGGCGC CCCGGTTCTC GGGCTGCGCG AACGCAAGAA ACAGCGCACC CGAACCACCC TGATCAACGC CGCCGTCGAA CTGTGCGACC GGCAGGGTTT CGAGAACACC ACCGTCGACC AGATCGCCGC GGTCGCCGAC GTCTCGCCGC GGACCTTCAG CCGGTACTTC GCGACCAAGG AAGCGGTGGT GCTGGCCGTC ATCGATGACA TCATCGAGAT CGTCGCCGTC GAACTCCGTA GGCAACCGCC GGACATCAGC CACCTCGAGG CGATCTTCCG CAGTCACATC CACGCGTTCA ACGCCACCAA GCGGGCCCCG CCGACGGGGC TGACCGAGGA GCGGCTGCTC GCGTCGGCGC GCATCGTGAC GTCGTCGGAA ACCCTCATAC ACGCGGCCAC CCGGTTCCGG CTCGACGCGG TGAACGCCGC GCTCGTCGAG CGCATGGGTA CCGCACCCGA CGACCGGCGG CTGCAACTGG TGGCCGCGGT GTGGGGCGCG ATCATGATGG CCGCACTCGC CGACCTCGGA CCCGGCGCCG ACTGGGGCAC CATGACCGCC GACGGCATCG TGTCCCGGAT CGAGCTGGCG TATGCCCAGT TCCTCGACGT GACCGCCGAC GTCAAGCAGC TGGTCTGA
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Protein sequence | MADLDGAPVL GLRERKKQRT RTTLINAAVE LCDRQGFENT TVDQIAAVAD VSPRTFSRYF ATKEAVVLAV IDDIIEIVAV ELRRQPPDIS HLEAIFRSHI HAFNATKRAP PTGLTEERLL ASARIVTSSE TLIHAATRFR LDAVNAALVE RMGTAPDDRR LQLVAAVWGA IMMAALADLG PGADWGTMTA DGIVSRIELA YAQFLDVTAD VKQLV
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