Gene Mjls_4837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4837 
Symbol 
ID4880536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5085267 
End bp5086703 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID640142143 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001073093 
Protein GI126437402 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.179905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC GGCGCAAGGC CATCATCCTG GTCTCGTGCT GTCTGAGCCT GCTGATCGTT 
TCCATGGACG CCACGATCGT CAACGTCGCG ATCCCGGCGA TCCGCTCGGA TCTGCACGCC
TCCCCGTCGC AGCTGCAGTG GGTGGTCGAC GTCTACACCC TGGTGCTGGC CTCGCTGTTG
ATCCTGGCGG GGGCGACCGG GGACCGGTTC GGCCGGCGCC GGGTGTTCCA GATCGGGCTG
ACCGTCTTCG CGTTCGGATC GCTGCTGTGC AGCCTCGCCC CCAACATCGA GACGCTGATC
GTGGCGCGCC TGCTGCAGGC CATCGGCGGT TCGATGATGA ATCCCGTTGC GTTGTCGATC
GTCTCGCAGA TCTTCACCGG CCGGGTGGAA CGGGCCCGGG CGCTGGGCAT CTGGGGTTCG
GTGGTGGGCA TCGCCATGTC GCTGGGCCCG ATCGTCGGGG GTCTGCTCAT CGAGACGGTC
AGCTGGCGGG CGGTCTTCTG GATCAACCTG CCGATCTGCG CGGCCGCGAT CATCCTCACC
GCGGTGTTCG TCCCCGAGAC CAAGTCGACG ACCATGCGCA ACATCGATCC GATCGGTCAG
GTCCTGGCCG TGGTGTTCCT GTTCGGGATC GTGTTCGCCC TGATCGAGGG GCCCGGTCTG
GGCTGGACCG ATCCGCTCAC CCTCACCGCC GCCGTGGTTG CGCTGGTGGC GTTCGCGGGG
TTCCTCCGCT ACGAATCACG CCGCCACGAC CCCTTCATCG ACCTGCGCTT CTTCCGCAGC
ATCCCGTTCA GCGCGGCGAC GGTGACCGCG GTGTCGGCGT TCGCCGGCTG GGGTGCGTTC
CTGTTCATGA TGTCGCTGTA CCTGCAGGGT GAGCGCGGCT ACTCCGCGAT GGAGACCGGT
CTCATCTACC TGCCCATCGC GATCGGGGCA CTGCTCTTCT CCCCGCTGTC GGGCCGGCTG
GTGGGGCGTT TCGGCGCCCG GCCGTCGCTG CTGATCGCCG GGGTGTTCAT CACGGCGGCG
TCGGCGATGC TGAGCTTCCT CACCGCGACC ACCCCGGTCT GGGAACTGCT CGTCGTGTTC
GCCGTCTTCG GTATCGGGTT CTCGATGGTC AACGCGCCGA TCACCAACGC CGCGGTCAGC
GGGATGCCGC TGGAGCGCGC GGGCGCGGCG TCGGCGGTGA CGTCCACCAG CAGGCAGATC
GGCGTGAGTA TCGGTGTGGC GCTGTGCGGT TCGGTCGCGG GCGGTGCGCT GGCCGGCACG
TCGACGGACT TCGCCGCCGC GGCGCGGCCG CTGTGGTTCG TCCTCGTCGG TTTCGGGTTG
ATCATCACCG CGCTGGCGGT GTACTCGACA TCGGGCCGCG CCATGCACTC CGCCGACCGG
CTGGCGCCGC TGATCTCGGG GGATGTGGTG GCTCAGGGGG CGACCCGTGC CGCGTAA
 
Protein sequence
MSARRKAIIL VSCCLSLLIV SMDATIVNVA IPAIRSDLHA SPSQLQWVVD VYTLVLASLL 
ILAGATGDRF GRRRVFQIGL TVFAFGSLLC SLAPNIETLI VARLLQAIGG SMMNPVALSI
VSQIFTGRVE RARALGIWGS VVGIAMSLGP IVGGLLIETV SWRAVFWINL PICAAAIILT
AVFVPETKST TMRNIDPIGQ VLAVVFLFGI VFALIEGPGL GWTDPLTLTA AVVALVAFAG
FLRYESRRHD PFIDLRFFRS IPFSAATVTA VSAFAGWGAF LFMMSLYLQG ERGYSAMETG
LIYLPIAIGA LLFSPLSGRL VGRFGARPSL LIAGVFITAA SAMLSFLTAT TPVWELLVVF
AVFGIGFSMV NAPITNAAVS GMPLERAGAA SAVTSTSRQI GVSIGVALCG SVAGGALAGT
STDFAAAARP LWFVLVGFGL IITALAVYST SGRAMHSADR LAPLISGDVV AQGATRAA