Gene Mjls_4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4827 
Symbol 
ID4880526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5075414 
End bp5077339 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content68% 
IMG OID640142133 
ProductABC transporter related 
Protein accessionYP_001073083 
Protein GI126437392 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.42011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAATC CCGACTCTCG CGCCCTCGTC TCGGCGCCCG CGATCGCTGC TCGGCGGGCG 
CGGCCGAGGG CCAGTTCAGA CCTGTGGCGG CTCCTGCCGT ACCTGATGCC CTACCGGGTG
CGCTGGATCG CGATGTTCGT CGTCGCGATC GCCAGCCTCG GCGCGACGAT CTCAATCCCG
CTGATGACCA AGGCCGTCAT CGACGGGCCG GTGCGCCACC AGGACCAGCA GGGGCTGTGG
GTGCTCGGCG CCGCCGCGAT GGGCGTCGGC ATCACCGAGG CCGTGCTGTG GTTCATCCGG
CGGTGGTTGG TGTCGCGCGC CACCATGGGC GTCGAGGCCG ACATCCGCAA GGACCTCTAC
GCCCGGCTGC AGATCCTGCC GATGAGTTTC CACGGCCGCT GGCAGTCCGG ACAGCTGCTG
TCACGCGTGA TGAACGATCT GTCCACGATC CGGCGGTTCA TGTCGTTCGG GTTGGTGTTC
CTGATCCTCA ACGGTCTGCA GATCGTCGTC GTGACCGCGA TCCTGCTGTC GATGTACTGG
CCGCTGGGTG TGGTCGTGCT GGTGTCGATC GTGCCGATCA CGCTGACGGT CCTGCACTTC
CAGCGGGAGT ACACGCGGCT GTCGCGGTTG GCTCAGGACC AGTCCGGCCA CGTCGCCACC
CACGTTGAGG AGTCGGCGCT GGGGCTGCGG GTGGTGAAGT CCTTCGGACG CGAGGACTAC
GTCTACGACC GGTTCGACCA GCAGCTGACC GATCTCTACG ACACCCAGGT CGCCCGGGTG
TCGGTGTCGG CGAAGTTCTG GACCCTGCTC GAGATCATCC CGAATCTGAC GTTGATCGTC
GTGCTCGGTT TCGGCGCGTA CGCCGCCGGC AACGGCTACG TCACGCTGGG CACTCTCGTC
GCGTTCATCA CGATGATGCT GTCGCTGGTG TGGCCGATCG CCTCGCTGGG GTTCCTGCTG
TCGATGATGC AGGAGTCCTA CACCGCGGCC AACCGCATCG CCGAGATCTT CGACGCGCCA
CGGGAGATCA CCGACGGCCC CCGCAACGAC ACCCCGCGCG GCGGCCGCCT CGAACTCGTC
GACGTGGGGT TCCGATTCCC GGACAGCGAG GACTGGGCCT TGCGGAATGT GAACGTGACC
GTCGAACCTG GCGAGACGGT GGCGCTGGTC GGGTCGACGG GGTCGGGTAA GTCGGTGCTG
GCCGCGCTGC TGTCGCGGCT CTACGACGTG ACCGAGGGGT CGATCCGCAT CGACGGCGTC
GACATCCGTG AGTTGTCGCT GCCGGCGCTG CGCCAGGCCG TCGCGACGGC GTTCGAGGAT
CCGACGCTGT TCTCGATGTC GGTCGCCGAG AACCTCCGGC TGGGCCGGCC GGACGCCACC
GAAGCACAGA TGGCCGAGGC CATCGAGGTG GCCGCCGCGC AGTTCGTCTA CGATCTGCCG
TTCGGGCTGG ACACCCGCAT CGGTGAACAG GGTATGAGCC TGTCCGGCGG TCAGCGGCAA
CGTCTTTCGC TGGCCCGCGC GATCCTCGCG GCCCCGAGGA TCCTCGTCCT CGACGACACC
CTGTCCGCGC TCGACGTCCA CACCGAGGCC GTCGTCGAGG AGGCGCTGCG CCGGGTGCTG
CACGCGGTCA CCGGCATCGT CGTCGCGCAC CGGGCGTCGA CCGTTCTCCT GGCCGACAAG
GTGGCGTTGC TCGAGAACGG AACCGTCACC CACGTCGGCA CCCATGCCGA ACTGCTCGCC
GATGTGCCGC AGTACCGCTA CCTGCTGGCC GCCGATGACG AACTCGACGA CGGCGCCGAA
CGCGCCGCCG ACTGGACGGA CGACGATGCG CGCGAGCGCA TCGAGCACGC CTACACCGAA
CACGAGGCGA CCGAGGACGC CTGCGCCGAT CCCCGGTTCG TGACATCGGA GGCCGAACGC
CGATGA
 
Protein sequence
MANPDSRALV SAPAIAARRA RPRASSDLWR LLPYLMPYRV RWIAMFVVAI ASLGATISIP 
LMTKAVIDGP VRHQDQQGLW VLGAAAMGVG ITEAVLWFIR RWLVSRATMG VEADIRKDLY
ARLQILPMSF HGRWQSGQLL SRVMNDLSTI RRFMSFGLVF LILNGLQIVV VTAILLSMYW
PLGVVVLVSI VPITLTVLHF QREYTRLSRL AQDQSGHVAT HVEESALGLR VVKSFGREDY
VYDRFDQQLT DLYDTQVARV SVSAKFWTLL EIIPNLTLIV VLGFGAYAAG NGYVTLGTLV
AFITMMLSLV WPIASLGFLL SMMQESYTAA NRIAEIFDAP REITDGPRND TPRGGRLELV
DVGFRFPDSE DWALRNVNVT VEPGETVALV GSTGSGKSVL AALLSRLYDV TEGSIRIDGV
DIRELSLPAL RQAVATAFED PTLFSMSVAE NLRLGRPDAT EAQMAEAIEV AAAQFVYDLP
FGLDTRIGEQ GMSLSGGQRQ RLSLARAILA APRILVLDDT LSALDVHTEA VVEEALRRVL
HAVTGIVVAH RASTVLLADK VALLENGTVT HVGTHAELLA DVPQYRYLLA ADDELDDGAE
RAADWTDDDA RERIEHAYTE HEATEDACAD PRFVTSEAER R