Gene Mjls_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4752 
Symbol 
ID4880451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5000393 
End bp5000974 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID640142057 
ProductRNA polymerase sigma factor SigK 
Protein accessionYP_001073008 
Protein GI126437317 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.399103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TGACCCAGCC GGTTAGGCTA CCGTTCGTGA CCACTGACCT CGACGTACTG 
TTACGGCAGG TGGCCGAGCG GGATGTCGAT GCGTTCGCGG CCCTCTACGA CCGGACCCGG
TCGCGGGTGT ACGGGATGGT CACCCGGGTG CTGCGGGATC CGGGCTACAG CGAAGAGACC
ACTCAGGACA TCTACCTGCA GGTGTGGCGG TCGGCCGGCA GCTACGACCC CAAGGCCGGG
TCGCCGATGG CGTGGCTGCT GACGTTGGCG CACCGTCGCG CCGTCGACCG GGTGCGTTCG
GAGGAGGCCG CCTCGCAGCG GGAGTCCCGG TACGGCGCCG CGAGCGTCGA CCCGCCCGTC
GACCACGTCG CCGACTCGGT GATCCTGCTC GACGAACGCC GTCGCGTCGT CGACTGCATG
GGATCGCTGT CGGATCTGCA ACGCGAAGCG ATCCAGCTGG CGTATTACGA GGGACTGACG
TATGTCCAGG TCTCCGAGCG TCTGTCGGCG AATCTGGCCA CAATCAAATC GCGGATGCGC
GACGGCATCC GCGGTCTCAA GAACTGTCTG GGCATGTCAT GA
 
Protein sequence
MTALTQPVRL PFVTTDLDVL LRQVAERDVD AFAALYDRTR SRVYGMVTRV LRDPGYSEET 
TQDIYLQVWR SAGSYDPKAG SPMAWLLTLA HRRAVDRVRS EEAASQRESR YGAASVDPPV
DHVADSVILL DERRRVVDCM GSLSDLQREA IQLAYYEGLT YVQVSERLSA NLATIKSRMR
DGIRGLKNCL GMS