| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4732 |
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| Symbol | |
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| ID | 4880431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 4978971 |
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| End bp | 4981247 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640142037 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001072988 |
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| Protein GI | 126437297 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.333349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGATC ACTTCGGTCG GGTGCGCCTG ACCAACCCGG ACAAGGTGCT GTACCCAGCG
ACGGGCACCA CCAAGGCCGA GGTGTTCGAG TACTACGTCG ACGTGGCCGA GGCGATGGTG
CCGCACATCG CCGGCCGGGC CGTCACCCGT AAGCGCTGGC CCAACGGCGT CGGCGAGCTG
GAGTTCTTCG AGAAGCAGCT GGCCAGCTCC GCACCCGACT GGCTCGCGCG CGGCACGATC
GTGCACAAAT CCGGCACCAC CACCTACCCG ATCATCGACA CCCGCGAAGG TCTGGCGTGG
ATCGCGCAGC AGGCCGCGCT GGAGGTGCAC GTGCCGCAGT GGCGGTTCGT CGGATCGGGT
GGCGACTTGA CTCCCGGCCC GGCCACCCGC ATCGTGTTCG ACCTCGACCC CGGCGAGGGC
GTCACGTTCC GTCAGCTGTG CGAGGTCGCG CACGAGGTCC GCGACCTGAT CACCGGCATC
GGGCTGACGG CCTATCCGCT GACCAGCGGC AGCAAGGGTC TGCACCTCTA CGTCCCGCTC
CAGGAGCCGA TCAGCTCCCA GGGCGCGTCG GTGCTCGCCA AACGCGTCGC CCAACAGCTC
GAGAAGGCCA TGCCCAAACA GGTCACCGCC ACGATGACCA AGAGCCTGCG CGAGGGCAAG
GTGTTCCTCG ACTGGAGCCA GAACAACGGC AACAAGACCA CGATCGCGCC GTACTCCCTG
CGCGGCCGCG AGCATCCAAC GGTTGCGGCG CCGCGCACCT GGGAGGAGAT CGAGGACCCC
GACCTGAGAC ATCTGCGATT CGACGAAGTG CTCGAGCGGA TCGAGGAGTT CGGGGACCTG
CTGGCCGATC TCGACGAGTA CGTGCCTGTC GAGGACCGGC TCACCAAGTA CCGCAGCATG
CGCGACCCGT CGAGGACGCC GGAGCCCGTG CCGCCGCGAC CGCCGAAGGC CGGCAACAAC
GACCGCTTCG TGATCCAGGA ACACCATGCC CGGCGGCTGC ACTACGACCT GCGTCTGGAA
CGCGACGGTG TGCTGGTCAG CTGGGCGGTG CCGAAGAACC TGCCCGACCG GCCCTCGGAA
AACCACCTCG CCGTGCACAC CGAGGACCAT CCGATGGAGT ACCTCACCTT CCACGGCACC
ATCCCGAAGG GTGAGTACGG CGGCGGCGAC ATGATCGTCT GGGACACCGG CACGTATGAG
ACCGAGAAGT TCAACGACCA CGCCCCGGAC GGACCCGCCA AGGGCGGGGA GGTCATCATC
ACCCTGCACG GCAACAGGAT CGACGGCCGT TACGCACTGA TCCAGACCGA CGGCAAGAAC
TGGCTCGCCC ACCGGATGAA GGATCAGGGC ACCCCGACGT TCGAGGACTT CGCGCCGATG
CTGGCCACCC ACGGCTCGGT CGAGAAGCTC ACGGCGAAAC AGTGGGCGTT CGAAGGCAAG
TGGGACGGCT ACCGGCTGCT GGTCGACGCC GACCATGGCA AGCTGTGCCT GAAGTCCCGT
AGCGGCCGCG ACGTCACCTC AGAATATCCC CAATTACGCG CGCTGGCAGC AGATCTCGCC
GACCACCATG TCGTGCTCGA CGGGGAGGTC GTCGCCCTCG ATGACAAGGG CGTGCCGAGC
TTCGGCCATA TGCAGAACCG GGCCCGGTCC ACCCGTGTCG AGTTCTGGGC GTTCGACATC
CTGCGCCTCG ACGGCCGTTG GCTGCTGAAG GCGAAGTACC GAGACCGCCG AAAGCTGTTG
GAGACGTTGG CCAGTGGGGG CGGACTGATC GTGCAACCCC TGCTCGACGG CGACGGCCTC
GAGGCGCTCG AGGACGCCCG CAAACGCAGG TGGGAGGGTG TTGTCGCCAA GAAATGGGAT
TCCACCTATC AGCCGGGGCG GCGCTCGTCG GCGTGGATCA AGGACAAACT GTGGAACACC
CAGGAGGTCG TGATCGGCGG CTGGCGCGAA GGCAATGGCG GCCGCAGCAG CGGCATCGGC
GCGCTGGTGC TCGGCATCCC CGGACCCGAC GGCCTGCAGT TCGTCGGCCG GGTCGGCACC
GGGTTCACCG AGAAGCAACT CGGCAGTCTC AAGAAGACGT TGGCGCCGCT GCACACCGAC
GAATCCCCCT TCGCGACAAG GCTTCCCACC CAGGACGCCA CGGGCGTGAC GTTCGTGCGG
CCCGAACTCG TCGGCGAGGT GCGCTACAGC GAGCGCACCG GCGACGGCCG GTTGCGCCAA
CCGTCCTGGC GGGGGCTGCG ACCGGACAAG ACGCCGGACG ACGTCGTGTG GGAGTAG
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| Protein sequence | MVDHFGRVRL TNPDKVLYPA TGTTKAEVFE YYVDVAEAMV PHIAGRAVTR KRWPNGVGEL
EFFEKQLASS APDWLARGTI VHKSGTTTYP IIDTREGLAW IAQQAALEVH VPQWRFVGSG
GDLTPGPATR IVFDLDPGEG VTFRQLCEVA HEVRDLITGI GLTAYPLTSG SKGLHLYVPL
QEPISSQGAS VLAKRVAQQL EKAMPKQVTA TMTKSLREGK VFLDWSQNNG NKTTIAPYSL
RGREHPTVAA PRTWEEIEDP DLRHLRFDEV LERIEEFGDL LADLDEYVPV EDRLTKYRSM
RDPSRTPEPV PPRPPKAGNN DRFVIQEHHA RRLHYDLRLE RDGVLVSWAV PKNLPDRPSE
NHLAVHTEDH PMEYLTFHGT IPKGEYGGGD MIVWDTGTYE TEKFNDHAPD GPAKGGEVII
TLHGNRIDGR YALIQTDGKN WLAHRMKDQG TPTFEDFAPM LATHGSVEKL TAKQWAFEGK
WDGYRLLVDA DHGKLCLKSR SGRDVTSEYP QLRALAADLA DHHVVLDGEV VALDDKGVPS
FGHMQNRARS TRVEFWAFDI LRLDGRWLLK AKYRDRRKLL ETLASGGGLI VQPLLDGDGL
EALEDARKRR WEGVVAKKWD STYQPGRRSS AWIKDKLWNT QEVVIGGWRE GNGGRSSGIG
ALVLGIPGPD GLQFVGRVGT GFTEKQLGSL KKTLAPLHTD ESPFATRLPT QDATGVTFVR
PELVGEVRYS ERTGDGRLRQ PSWRGLRPDK TPDDVVWE
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