Gene Mjls_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4721 
Symbol 
ID4880420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4966505 
End bp4967671 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID640142026 
Productmajor facilitator transporter 
Protein accessionYP_001072977 
Protein GI126437286 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.149927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACTC GGCAGGCCTG GCTCACCCGC AATGTCCGAC TGTTGTCGGC GGTGTCGTTC 
CTGCAGGACG CGGCCAGCGA GTTGCTCTAC CCGCTGCTGC CGATCTACCT GACCTCGGTG
CTGGGGGCGC CGGCGGCGGT GGTCGGGGCG GTCGAGGGTG CCGCCGAGGG GGCGGCCTCG
CTGACCAAGC TGGCCTCCGG ACCGCTGGGG GACCGGTTCG CCAGACGGCC GCTGATCGCC
ACCGGCTACG GGATGGCGGC GCTGGGCAAG GTCATCGTGG CCGCCGCCGG GACCTGGCCT
GGCGTGCTGG CCGGACGGGT CACCGACCGG CTCGGCAAGG GTCTGCGCGG CGCCCCGCGC
GATGCGCTGC TGGTGGACGG TATCGACCCC GCCGCACGAG GCCGGGTCTT CGGATTCCAC
CGTGCCATGG ACACTTTCGG CGCGGTGGTC GGCCCGCTGC TCGGGCTGGC CGGCTATGAA
CTGCTCGACC ATCAGATCGC ACCGCTGCTG TGGGTGGCGG TGATTCCCGC GGTGCTGTCC
GTGGCGCTGG TGTTCTGCGT GCGCGAACGG GCCAGGGCGG TGCCGACGGT GGCGCGGCCG
CCGCTGTTGT CGCGGGTCAG GGACCTCCCT CGGCGCTACT GGCGGGTGAC CGCGCTGCTG
GTCGGCTTCG GCGTGGTGAA CTTCCCCGAC GCGCTTCTCC TGTTGCGGCT CAACGAGATC
GGTTTCTCCG TCGTCGAGGT GATCCTGGCC TACGTCGGCT ACAACGTCGT GTACGCGGTC
GCGAGTTACC CGGCCGGCGC GTTGGCCGAC CGCGTCGGCA CACCGGCCGT GTTCGCCGTC
GGGTTGGGGT TCTTCGCGGT CGGTTACACC GGGCTGGGGC TGACCACCGA CACGCTCACC
GCATGGATGC TGATCGGGGT CTACGGGATG TTCACCGCAT GCACCGACGG GGTCGGCAAG
GCGTGGATCT CATCGCTGGT CGGCGCGGAC GTGCAGGCCA GCGCCCAGGG CGTGTTCCAG
GGCGCAAGTG GGTTCGCGAT CCTGGCGGCC GGGCTGTGGG CGGGTCTGCT GTGGGGCGCC
GACGGGACGG TGCCGCTGCT GATCTCCGGC CTGGCGGGTG GGGTGTTCGC CGTGATCGTC
GCGGTGGTCG CTGTGCGGCA CCGCTGA
 
Protein sequence
MPTRQAWLTR NVRLLSAVSF LQDAASELLY PLLPIYLTSV LGAPAAVVGA VEGAAEGAAS 
LTKLASGPLG DRFARRPLIA TGYGMAALGK VIVAAAGTWP GVLAGRVTDR LGKGLRGAPR
DALLVDGIDP AARGRVFGFH RAMDTFGAVV GPLLGLAGYE LLDHQIAPLL WVAVIPAVLS
VALVFCVRER ARAVPTVARP PLLSRVRDLP RRYWRVTALL VGFGVVNFPD ALLLLRLNEI
GFSVVEVILA YVGYNVVYAV ASYPAGALAD RVGTPAVFAV GLGFFAVGYT GLGLTTDTLT
AWMLIGVYGM FTACTDGVGK AWISSLVGAD VQASAQGVFQ GASGFAILAA GLWAGLLWGA
DGTVPLLISG LAGGVFAVIV AVVAVRHR