Gene Mjls_4698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4698 
Symbol 
ID4880397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4938538 
End bp4939656 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID640142003 
Productdiguanylate cyclase 
Protein accessionYP_001072954 
Protein GI126437263 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG CAATGCGCGA ATGGTGGCGC CAACCAGACC ACTACTACTG GCTCACCGCA 
TTCCTCGCGG CTCGCGGCGC GCAACGCGGT ATCTGCCGCA TGGTCGCGGG GTCGCTCCTC
GGATTCGCTC TCGTCCTGCT GGTGTCGATG TTCAGCCCGG CGGGACCGAC GGGCCTGGCC
GGGCGCATCG GGACGGCGGT CATCGCGGTG GCCCTCATCG GCATGGCGAT CGGCTGGTGG
CGCGAGGGCT GGCCCAGCCA ACGTCAATCG GCCGGGTTCG TGGTCGCGGC CGCACTGGCG
ATCGGCGTCG GGTGTCTGAT CAAAGCCGAT CCGTTCAACG GCATGTTCGG TGCGGCGACG
TTCGCGGTCC TCGCCGGCTA CATCGCGTTC TTCCATACGC CGAAGATGAT GGCGTTCAAC
TTCGTGGTGG CACTGCTCAC CTCGACGGTG CTCGCCGTGC GCGTGGCGCT CGACGGCGAT
CCGGCGCTGG CCATCTCGAC GCTGATATTC CTGGTCATCC TCTACGTCGC GACCCCGTCG
GTGTGTCATG CGCTGGTCCA CCTGCTGGGC ATCGACGTCC TCAACGCCGA CATCGACCCG
CTGACCGGCC TCTACAACCG CGACGCCTTC GACCGTGCCG CTGCGGCCTA CATCAGCTCC
CGCAACCGCG ACGACGACCG GTACTTCGTC CTCGTCGTCG TGGACCTGGA CAACTTCGCG
CTGCTCACCC AGGCCAAGGG CCGGCAGGCC GGCGAGCGGG CGCGGGTCGC CGCGGCGCAG
ACCCTGCGGG AGACCACGCG GCAGAACGCG GTGATCGCCC ACCTACCCGA GACCGAGTTT
TTGATCGCCG ACAGCTTCCC GACGACCGAC AGCTCAGCGC TCGTCGAGCG GGTGCGCAGT
GCGATCCGCA CCACCCCGCC GCGGACGTCG GCGAGTATCG GCGTGGTGAG CACGCCGATG
CTGGGGCTCG TGGAACGCCC ACCGGAGCAG GTCCTCGACG AGTTGCTCGA GCTCGCCCGT
TCGGCCGTCG TCGTGGCCCG CCGGGCCGGC GGCAATCAGG CGCACCACAT CAACTGCCCA
CCGCTGCGGG CGCTCGAAGA CGACGAACCG CCGCTCTAA
 
Protein sequence
MTGAMREWWR QPDHYYWLTA FLAARGAQRG ICRMVAGSLL GFALVLLVSM FSPAGPTGLA 
GRIGTAVIAV ALIGMAIGWW REGWPSQRQS AGFVVAAALA IGVGCLIKAD PFNGMFGAAT
FAVLAGYIAF FHTPKMMAFN FVVALLTSTV LAVRVALDGD PALAISTLIF LVILYVATPS
VCHALVHLLG IDVLNADIDP LTGLYNRDAF DRAAAAYISS RNRDDDRYFV LVVVDLDNFA
LLTQAKGRQA GERARVAAAQ TLRETTRQNA VIAHLPETEF LIADSFPTTD SSALVERVRS
AIRTTPPRTS ASIGVVSTPM LGLVERPPEQ VLDELLELAR SAVVVARRAG GNQAHHINCP
PLRALEDDEP PL