Gene Mjls_4650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4650 
Symbol 
ID4880349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4885741 
End bp4886640 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID640141954 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001072906 
Protein GI126437215 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGACCGAGCA CGCCGAGCGG TTCACCCTGC TGCGGCCGCT GCTGTTCACG 
ATCGCCTACG AGATCCTCGG CAGCGCAACC GAATCCGACG ACGTGCTGCA GGAGAGCTAC
CTGCGCTGGG CCGAGGTGGA CCTCGATACG GTGCACGACA CCAAGGCCTA CCTCGCCCAG
CTCGTCACCC GGCAGGCCCT CAACGCGCTG CGGGCGCAGT CCCGGCGGCG GGAGGACTAC
ATCGGGCCGT GGCTGCCCGA ACCGCTGCTG GTGCAATCGA AGGACGCCGA GGCCGATGTG
GTCCTGGCCG AATCGGTGTC GATGGCCATG CTCGTGGTCC TCGAGACCCT CACCCCCGAC
GAGCGGGCGG TGTTCGTGCT GCGCGAGGTG TTCGGCTTCA GCCATGACGA GATCGCCGCC
GCGGTCGGCA AGTCGACGAC GGCGGTGCGG CAGATGGCCC ACCGCGCCCG CGAACACGTC
CAGTCACGCC GCAAACGGTT CGAACCGGTC GATCCGAAGA CGTCGACGGA GATCACCATG
CGGTTCTTCG CCGCGGCGTC GACCGGTGAC CTCGACGGGC TGATGGAACT GCTGGCACCC
GATGTGGTGT GGACCGCCGA CAGCGCGGGC AAGCGCAGCG CGGCGCGCCG GCCCGTCACC
GGCGCCGAAC GGGTCGGCAG GCTGGTCCTG GGCCTGCTGC GGGCCGCGGG CGAAGCCGGC
CGGATCGAAC CGGCCGTGTA CAACAACGCG CCCGCGCTCA AGCTCTTCCT CGGGGACAGC
TTCGAGGGCA TCGTGACCGT CGAGATCGTG GACGGCCGGA TCAGCCACTT CTACGCGATG
CGCAACCCCG ACAAGCTGGT CGGCGTGGAC GTCCCGCGGG AGATCACCCG CACGGTCTGA
 
Protein sequence
MSTTTEHAER FTLLRPLLFT IAYEILGSAT ESDDVLQESY LRWAEVDLDT VHDTKAYLAQ 
LVTRQALNAL RAQSRRREDY IGPWLPEPLL VQSKDAEADV VLAESVSMAM LVVLETLTPD
ERAVFVLREV FGFSHDEIAA AVGKSTTAVR QMAHRAREHV QSRRKRFEPV DPKTSTEITM
RFFAAASTGD LDGLMELLAP DVVWTADSAG KRSAARRPVT GAERVGRLVL GLLRAAGEAG
RIEPAVYNNA PALKLFLGDS FEGIVTVEIV DGRISHFYAM RNPDKLVGVD VPREITRTV