Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4642 |
Symbol | ksgA |
ID | 4880341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4876402 |
End bp | 4877286 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640141946 |
Product | dimethyladenosine transferase |
Protein accession | YP_001072898 |
Protein GI | 126437207 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0320106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAATCC GACTACTCGG GCGCACCGAG ATCCGGCGCC TTGCGAAGGA CATCGATTTT CGCCCGCGCA AGTCGTTCGG GCAAAATTTC GTCCATGACG CCAACACCGT GCGCCGGATC GTCTCGGCCT CCGGTGTGCA CCGCCATGAC CACGTCCTCG AGGTGGGTCC CGGCCTCGGT TCGCTGACGC TGGCGCTGCT CGATCGCGGC GCGCACGTGA CGGCGGTGGA GATCGATCCG CTGCTCGCGC AACAGCTTCC CACGACGATC GCCGATCATT CGCACAGCGA GATCAACCGT CTGACGGTCC TCAACCAGGA CATCCTGACG CTGATGCCGT CGGATCTGGA GAACCAGCCG ACCGCGCTGG TCGCCAACCT GCCGTACAAC GTCGCGGTGC CGGCCCTGCT CCATCTGCTC GCCGAATTCC CGACGATCCG CTCGGTGATG GTCATGGTCC AGGCCGAGGT GGCCGAGCGC CTGGCCGCCG ATCCGGGCGG TAAGGATTAC GGCGTGCCGA GCGCGAAGGT GCGGTTCTAC GGCAACGTCC GCCGCTACGG GATGGTCTCG CCGACGGTGT TCTGGCCCAT CCCGCGGGTG TATTCGGGAT TGGTCCGCAT CGACCGCTAC GAGACCTCGC CGTGGCCGAC CGACGCCGAT TTCCGCGCCC AGGTCTTCGA TCTGATCGAC ATCGCGTTCG CGCAGCGCCG CAAGACCTCG CGCAACGCGT TCGCCGAGTG GGCCGGGTCC GGTAACGAAT CCGCCCGCCG CCTCCTGGCC GCCAGCATCG ACCCGTCGCG ACGGGGTGAG ACCCTTGCGA TCGCGGACTT CGTCCGGTTG CTGCAGCGCT CCGGAGAAGC CGAGGAACAG GTCCGCGTCC AGTAG
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Protein sequence | MTIRLLGRTE IRRLAKDIDF RPRKSFGQNF VHDANTVRRI VSASGVHRHD HVLEVGPGLG SLTLALLDRG AHVTAVEIDP LLAQQLPTTI ADHSHSEINR LTVLNQDILT LMPSDLENQP TALVANLPYN VAVPALLHLL AEFPTIRSVM VMVQAEVAER LAADPGGKDY GVPSAKVRFY GNVRRYGMVS PTVFWPIPRV YSGLVRIDRY ETSPWPTDAD FRAQVFDLID IAFAQRRKTS RNAFAEWAGS GNESARRLLA ASIDPSRRGE TLAIADFVRL LQRSGEAEEQ VRVQ
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