Gene Mjls_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4480 
Symbol 
ID4880184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4708428 
End bp4710326 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content70% 
IMG OID640141788 
Productcopper resistance protein CopC 
Protein accessionYP_001072741 
Protein GI126437050 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.427384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.536935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC TGCGGTGTGC GCTCATCGCG TGTGCGATCG CCGTGCAGAC ATCGGTGGGT 
CCGGGAGCGG GCACCGCGCA GGCGCATCCC ACGTTGCTGT TCACTGAACC CGCAGCAGAG
ACCGCGGTTG CGACGTCCCC TGAGGCGATC ACACTGCTGT TCAACGAACC GGTCACCATC
GGCACGCGCG CGATTGTGGT GCTCGATCAA TCCCGCCGCG AAGTACCGGT CGGGCCCGCC
AGCCTCGCGC GCGACGGCCG CTTCGTCACC GCCGCGCCGG TTTCTGCCTT GGAGCCGGGG
ACCTATACCG TCCGTTGGCG CGTCACCGGC GGTGACGGTG ATCAGGTCGA GCAGGAGTTC
CGGTTCGCGG TCGGACTTGC GGTGTCGACT GCCGCGCCGA CTGCTTCCGC GACGCCGGCC
TGGGGTGAAA GTGCCCTGCG CTGGCTGCTT TTCGCCGGGT TGGCGGCCGC CGTCGGTGGT
TTGATTGGCC GCCATGCGAC CGATACTGCA CGTTCCGCAC GCCCGGAATT GCCACCCGTG
CGGTCGTGGG CGCCGGCAGG GATGGCGGTT GCGCTCATCG CAGCCATGGC CTTGGTCGCT
GGTCGGGCCA TTGACGCCGG CACCGTCAAC GCGGTGTGGG ATGGCCGCGC AGGTGTGCTG
TTGTTGATTG AGACCGGTGG ACTGTTGACT GCGATGACCC TTGCGAGTCG GGGTCGGTGG
GCTCTGGTTC CGCTGGCGGT GGTGATCGCC GCCGACGGGA TCCGCTCGCA TGCGGGCACA
ACATTCGGCG GCTGGGGCGC GGTTCTGACC GGGGTGCACC TGGCGGCGGC CACGGTTTGG
GTCGGCGCGC TCGTGCACAC GGCGCGGGCG GTGGTGGCGT GGCGAGCAGT GTCGACCGCC
GTCCGTTGGG TCTTGGCCTC CTATGTCCGG CTGGCGCTGG TGACCTATCT TGTGGCGGTG
GCCACGGGTG TGATCAGCGC GCTGGTGTTA GTCCCCCTGC CGCAACTGGT CTCGACCACC
TACGGCAAAG TGCTACTGAT CAAACTCGGG CTCGTCGTGG CAGCGTCGGC GGCGGCGCTG
GCCTCGAGGC TGATCCACCG CGATACCCGT CAGGCGACGC GGCTACGCAG CGCGATGGCC
ATCGAATCCG CGGTACTGGT GGGTGTGCTG GCAGCCAGCG CTGTGCTGGT ATCCACACCG
CCGCCCACCG GGACGGCCTC GGCGGCGCCG CCACCGCAAC CAACCGGTCC TGTCGTGTCG
CTGGGCGCCC TGGCCGGCCA GGTCGGGATC AGCCTGACCG CCAGCGAAGG GCTGCTCGTG
GTCCGGCTGT CCACACCGCG GCGCGGTGAC TACTACGCTG CGGAACCCAA CCAGCACTAC
AGCGTGGTGG CCTCACTGGG TGAGTCGGCG CTCGCGCTGA CCGGCTGCGG CAGCGGATGC
TATTTCGCGC GGCCGGCGTG GCGCGACGGT GACAACGTGC TCACGCTGCG CGCCGGAGCC
ACCGGCTGGC CCGGCGGCGC CACCGGGCTG ATCGTGTCGT GGCCACCGCG TCCTGGCGCC
GCTGATCTGG CCGCAGCCGT CGCCGCGACC CGCGCCGCGG GCAGGCTCGT CGTCTATGAA
ACCGTCACCA GCGACACCAC CGCCGGCCCA CCCGAACCCA ACCGGCTCGA CCTGGACGCC
GGCTTCTTCC TCTCCCAGGA ACCCTATGCC GATGGCACCG CCCCGATCGC GGCGCGAACC
TCGCCCCCGG GCGCGGCGGT GCGCTTAGCG CTGGGTTATC CCGCCGCCTC CATCAACGTC
CAGCTCACTC TCGACGACCG CAGCCGTATC ACCGAGGAAA TCCTCACCGA CCCAAAGCAT
CTCGTGACAC GCCGCATCAT CTATCCCGGC CCTGAGTAA
 
Protein sequence
MTWLRCALIA CAIAVQTSVG PGAGTAQAHP TLLFTEPAAE TAVATSPEAI TLLFNEPVTI 
GTRAIVVLDQ SRREVPVGPA SLARDGRFVT AAPVSALEPG TYTVRWRVTG GDGDQVEQEF
RFAVGLAVST AAPTASATPA WGESALRWLL FAGLAAAVGG LIGRHATDTA RSARPELPPV
RSWAPAGMAV ALIAAMALVA GRAIDAGTVN AVWDGRAGVL LLIETGGLLT AMTLASRGRW
ALVPLAVVIA ADGIRSHAGT TFGGWGAVLT GVHLAAATVW VGALVHTARA VVAWRAVSTA
VRWVLASYVR LALVTYLVAV ATGVISALVL VPLPQLVSTT YGKVLLIKLG LVVAASAAAL
ASRLIHRDTR QATRLRSAMA IESAVLVGVL AASAVLVSTP PPTGTASAAP PPQPTGPVVS
LGALAGQVGI SLTASEGLLV VRLSTPRRGD YYAAEPNQHY SVVASLGESA LALTGCGSGC
YFARPAWRDG DNVLTLRAGA TGWPGGATGL IVSWPPRPGA ADLAAAVAAT RAAGRLVVYE
TVTSDTTAGP PEPNRLDLDA GFFLSQEPYA DGTAPIAART SPPGAAVRLA LGYPAASINV
QLTLDDRSRI TEEILTDPKH LVTRRIIYPG PE