Gene Mjls_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4413 
Symbol 
ID4880118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4647385 
End bp4648179 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID640141721 
ProductM15D family D-Ala-D-Ala dipeptidase VanX 
Protein accessionYP_001072675 
Protein GI126436984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.548196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.375083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA CACTGAGGGG TGTGCTGGGG ATCGTGTCCG CCGCGGTGCT GGCGGCGGTG 
GCGGCGCCGG TCGCTTCGGC CCAGCCCGAA CCGACGGCCC CGGCGGACTT CGTCTCGCTC
ACCGACGTCG ACCCGTCGAT CCTGCTGGAC GTCCGCTACA TCACGCCGCA CAACTTCACC
GGTGATCCGG TCGACGGGTA CCGGGCGCCG CTGTGCCTGC TCACCCGGCC GGCGGCCGAG
GCGCTGCGGC GCGCGCAGCA GGAGTTCGTC GAACAGGGCT ACTCGCTGAA GGTCTACGAC
TGCTACCGGC CGCAGCGCGC CGTGAACGAT TTCGTGGCGT GGGCGAAGAA CCTGCCCGAC
CAGCGGATGA AGGCCGAGTT CTACCCCCGA GTGGACAAGA CGCAGCTGTT CGCCGACGGG
TACATCGCCG AGAACTCGGG GCACAGCCGC GGCAGCACCG TCGACCTCAC GCTGGTCGCG
TTGCCCGCCG AGGAGCAGCC GGCCTTCGTG CCGGGCCAGC CACTGGTCGA CTGCGCCGCA
CCGGTCGCGG AACGCTTCGG CGACAACACC ATCGACATGG GCACCGGTTA CGACTGCTTC
GACACCCTGG CGCACACGCT CGACCCGCGG ATCCAGGGTG AGCAGCTCAA GAACCGGCTG
CTGCTGAAGG ACGGGCTCGA GAAGCAGGGG TTGGAGAACT ACGAGAACGA GTGGTGGCAC
TTCACGTTCA AACCCGAGAC TTACCCGGAC ACCTACTTCG ACTTCCCCGT CGACCCGTCC
TCGCTGACGG GTTAG
 
Protein sequence
MPKTLRGVLG IVSAAVLAAV AAPVASAQPE PTAPADFVSL TDVDPSILLD VRYITPHNFT 
GDPVDGYRAP LCLLTRPAAE ALRRAQQEFV EQGYSLKVYD CYRPQRAVND FVAWAKNLPD
QRMKAEFYPR VDKTQLFADG YIAENSGHSR GSTVDLTLVA LPAEEQPAFV PGQPLVDCAA
PVAERFGDNT IDMGTGYDCF DTLAHTLDPR IQGEQLKNRL LLKDGLEKQG LENYENEWWH
FTFKPETYPD TYFDFPVDPS SLTG