Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4353 |
Symbol | fumC |
ID | 4880058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4588201 |
End bp | 4589622 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640141661 |
Product | fumarate hydratase |
Protein accession | YP_001072615 |
Protein GI | 126436924 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.136649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCG ACAGCGCTGT CGACCAGAAC ACCGAGTACC GCATCGAACA CGACACCATG GGCGAGGTCC GGGTGCCCAA GGATGCGCTG TGGCGGGCGC AGACCCAGCG CGCCGTCGAG AACTTCCCGA TCTCGGGCCG CGGCCTCGAG CGCACCCAGA TCCGCGCGCT GGGACTGCTC AAGGGCGCCT GCGCGCAGGT GAACAAGGAT CTCGGCCTGC TCGCTCCCGA AAAGGCGGAT GCGATCATCG CCGCGGCCGC CGAGATCGCC GACGGGCGTC ACGACGACCA GTTCCCGATC GACGTGTTCC AGACCGGTTC GGGCACCAGC TCGAACATGA ACACCAACGA GGTCATCGCC TCGATCGCGG CGGCGAACGG CGTGACCGTC CACCCCAACG ACGACGTGAA CATGTCGCAG AGCTCCAACG ACACGTTCCC GACGGCCACC CACATCGCGG CGACGGAAGC CGCTGTGCGC CACCTGATCC CGGCGCTCGA GGTGCTGCAC GAATCGCTGG CCGGCAAGGC GCGGCAGTGG CGCACGGTCG TGAAGTCCGG GCGCACGCAC CTGATGGACG CGGTGCCGGT GACGCTGGGC CAGGAATTCG GCGGTTACGC CCGTCAGATC GAGGCCGGTA TCGAACGTGT CAAGGCGACG CTGCCCCGGC TGGGTGAGCT GGCCATCGGC GGTACCGCCG TCGGCACCGG GCTCAACGCG CCCGACGGTT TCGGCGCCAA GGTCGTCGAG GTGCTCGTCG ACCAGACCGG TCTGGGCGAA TTGACCACGG CCAAGGACTC TTTCGAGGCG CAGGCCGCCC GCGACGGGCT GGTCGAGGCG TCCGGCGCCC TGCGGGTGAT CGCGGTGTCG CTGACCAAGA TCGCCAACGA CATCCGCTGG ATGGGTTCGG GCCCGCTGAC CGGTCTGGCC GAGATCCAGC TGCCGGATCT GCAGCCGGGC AGCTCGATCA TGCCGGGCAA GGTGAATCCC GTTCTGCCCG AAGCCGTCAC GCAGGTCGCC GCCCAGGTGG TCGGCAACGA CGCCGCCGTC GCATGGGGTG GCGCGGCCGG CGCGTTCGAG CTCAACGTGT ACATCCCGAT GATGGCGCGC AACCTGCTCG AGTCGTTCAA GCTGCTGACC AACGTGTCGC GGCTGTTCGC CGAGCGGTGC ATCGACGGAC TGGTCGCCAA CGAGGAGCAC ATGCGTGAGC AGGCCGAGTC GTCGCCGTCG ATCGTGACGC CGCTGAACTC GGCGATCGGC TACGAGGAGG CGGCCAAGGT CGCCAAGGAA GCGCTCAAGG AGAAGAAGAC GATCCGCCAG ACGGTCATCG ACCGCGGGCT GATCGGCGAC AAGCTCTCCG AGGAGGAACT CGACCGCCGC CTCGACGTGC TGGCGATGGC GAAGGTCAAG CAGGGCAAGT AG
|
Protein sequence | MTADSAVDQN TEYRIEHDTM GEVRVPKDAL WRAQTQRAVE NFPISGRGLE RTQIRALGLL KGACAQVNKD LGLLAPEKAD AIIAAAAEIA DGRHDDQFPI DVFQTGSGTS SNMNTNEVIA SIAAANGVTV HPNDDVNMSQ SSNDTFPTAT HIAATEAAVR HLIPALEVLH ESLAGKARQW RTVVKSGRTH LMDAVPVTLG QEFGGYARQI EAGIERVKAT LPRLGELAIG GTAVGTGLNA PDGFGAKVVE VLVDQTGLGE LTTAKDSFEA QAARDGLVEA SGALRVIAVS LTKIANDIRW MGSGPLTGLA EIQLPDLQPG SSIMPGKVNP VLPEAVTQVA AQVVGNDAAV AWGGAAGAFE LNVYIPMMAR NLLESFKLLT NVSRLFAERC IDGLVANEEH MREQAESSPS IVTPLNSAIG YEEAAKVAKE ALKEKKTIRQ TVIDRGLIGD KLSEEELDRR LDVLAMAKVK QGK
|
| |