Gene Mjls_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4338 
SymbolxseA 
ID4880043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4575376 
End bp4576611 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content72% 
IMG OID640141646 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_001072600 
Protein GI126436909 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.122512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC CGGCCGACGA CCAGGGCAAA TCCCCTGAGA ATCCCTGGCC GGTCCGGGCT 
GTGGCCACCC GTGTCGCCAA GTACATCGAC CGGCTCGGGA TGGTGTGGAT CGAGGGCCAG
CTGACCGAGC TCAAGATCCG CCAGACGACG GCCTGGATGG TGCTGCGCGA TCCGGCCGCC
GACATGTCGC TGTCGGTGAG CTGCCCGCGC GACCTCGTCG CGAACGCGCC GGTGCCGCTG
TCGGAGGGCA CCCAGGTCAT CGTGCTGGGC AAACCGCAGT TCTACACCCG CAACGGCTCG
TTCAGCCTGC GGATCAGCGA GATCCGCGCG GTCGGCATCG GCGAACTGCT GGCCCGCATC
GACCGCCTGC GTCGGCTGCT CGACGCCGAG GGCCTGTTCG ATCCCCGGCT CAAACGGCCC
ATCCCGTTCC TGCCCGGCAC GATCGGCCTG ATCACCGGCC GCGCCAGCCA TGCCGAACGG
GACGTGATGA CCGTCGCGGC CAACCGGTGG CCCGCGGTCC GCTTCGCCGT CCGCAACCCC
ATCGTGCAGG GCCCCAACGC GGTGCCGCAG ATCGTCGGCG CGCTTCGCGA ACTCGACCGC
GACCCCGGTG TGGACGTCAT CGTGCTGGCC CGCGGCGGCG GCAGCGTCGA GGATCTGCTG
CCGTTCTCCG ACGAGACGCT GTGCCGGGAG ATCGCGAGTT GCACGACCCC GGTGGTCAGC
GCGGTCGGCC ACGAACCGGA CAACCCGCTG TGCGACCTGG TCGCCGACCT GCGCGCGGCC
ACCCCGACCG ACGCGGCCAA ACGCGTCGTA CCCGACGCCG CCGCCGAACA GGCGTTCGTC
ACCGACCTGC GCCGGCGCAG CGCCCGCGCG TTGCGCCAGT GGGTGCACCG CGAACAGCAC
CACCTCGACC AGTTGCGCAG CCGACCGGTG CTGGCCCGTC CGCTGCAGGC GATCGATGCG
CGCGCCGACG AGGTGCACCG CGCCGTGGCC GCGGCCCGTC GCGACGTGCG CCGGATGGTG
ACGGTGGAAT CCGAACGCGT GGGCCATCTG TCCGCCCGAC TGACGGCGCT CGGGCCGGCC
GCCACACTCG CGCGTGGCTA CGCCGTCGTA CAGACCATGC CCGATACGAA CGTTCTGCGG
ACGACTGCCG ATGCGCCGGC GGGTACGCGC CTGCGCATCC GGGTGGCCGA CGGCGCGATC
ACCGCGGTGA GTGAGGGGAC CGATGAAGCC CATTAG
 
Protein sequence
MTTPADDQGK SPENPWPVRA VATRVAKYID RLGMVWIEGQ LTELKIRQTT AWMVLRDPAA 
DMSLSVSCPR DLVANAPVPL SEGTQVIVLG KPQFYTRNGS FSLRISEIRA VGIGELLARI
DRLRRLLDAE GLFDPRLKRP IPFLPGTIGL ITGRASHAER DVMTVAANRW PAVRFAVRNP
IVQGPNAVPQ IVGALRELDR DPGVDVIVLA RGGGSVEDLL PFSDETLCRE IASCTTPVVS
AVGHEPDNPL CDLVADLRAA TPTDAAKRVV PDAAAEQAFV TDLRRRSARA LRQWVHREQH
HLDQLRSRPV LARPLQAIDA RADEVHRAVA AARRDVRRMV TVESERVGHL SARLTALGPA
ATLARGYAVV QTMPDTNVLR TTADAPAGTR LRIRVADGAI TAVSEGTDEA H