Gene Mjls_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4217 
Symbol 
ID4879923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4452858 
End bp4453664 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID640141526 
Product2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 
Protein accessionYP_001072480 
Protein GI126436789 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.651239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCT GGCTCACCGG TCGGCGGGCC CTTGTCGTGG GCGCCGGTTC GGGGATCGGC 
AGGGCGGTGG TCGACGCCTT CCTCGATGAG GGGGCGCGCG TGGCCGTTCT GGACCGCGAT
GAGCAGAAGT GCTCGGCGCT GAGCGCTGAC CATCCCGATG TGCCCGTGGT GTGTGGCGAC
GCGAGCTTCC GCGCCGCCAA CGACGAGGCC GTCGCCGCCG CGGTTGAGGC GTTCGGTGGT
CTCGACGTGC TCGTCAACTG CGTCGGGGTG TTCGACTTCT ACCGCAGCAT CGAAGAAATC
GACGCGGACG TGCTCGACGA GGCATTCGAC GAGATTTTCC GTGTCAACGT CAGAAGCTAT
CTGCATTCGG TCAAGGCGGC ACTTCCCGCG CTGCGGGAGG CCGCCCGGCC CGTCATCGTG
CTGACAGAGT CCACCTCCGG GTACTACGCG GGGCGAGGTG GAGTCCTCTA CGTCGCTTCC
AAATTCGCTG TCCGCGGACT GGTCACCGCG CTGTCGCACG ACCTGGCGCC GCAGATCAGG
GTCAATGGTG TCGCACCCGG CGCCACACTC GGCACCGACC TTCGGGGTCT GGCCGGGCTT
GGCATGGCGG ACCGCAGCAT CTCGAACGTG CCCGGTCGTG CCGAAGAGAT GTCGGCGCGT
GTTCCCCTGC AGGTCGCGTT GTCCGCGCAG GATCACGCGT GGAGTTACGT GTTCCTGGCA
TCGCATCGCG CCCGCGGCAT CACCGGCGAC GTCATCCACC CCGACGGAGG CATGAGTGTC
GCCGCGGCAC CGAAAAAGCG CAGTTGA
 
Protein sequence
MTGWLTGRRA LVVGAGSGIG RAVVDAFLDE GARVAVLDRD EQKCSALSAD HPDVPVVCGD 
ASFRAANDEA VAAAVEAFGG LDVLVNCVGV FDFYRSIEEI DADVLDEAFD EIFRVNVRSY
LHSVKAALPA LREAARPVIV LTESTSGYYA GRGGVLYVAS KFAVRGLVTA LSHDLAPQIR
VNGVAPGATL GTDLRGLAGL GMADRSISNV PGRAEEMSAR VPLQVALSAQ DHAWSYVFLA
SHRARGITGD VIHPDGGMSV AAAPKKRS