| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4188 |
|---|
| Symbol | |
|---|
| ID | 4879894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4425860 |
|---|
| End bp | 4427170 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640141497 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001072451 |
|---|
| Protein GI | 126436760 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.658459 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT CTGGCGGCGA GAGGTACCTG GGATGGTGGA CGGCGATCCT GCTCGTCGTC
ATCGTCGCCC TGATGCTGTT GTCGGCTGGA TTGTTCAAGG GATCGTTCCG GTCGTTTGTC
CCGGTCACAT TGACGTCTGA CCGCTCCGGT TTGATCATGG AGACCGGTAA CAAGGTCAGG
TTCCGCGGGG TACAGGTCGG ACGGGTCGGC TCGGTGACCG CAGGGACAGA ACGGGTCAGC
CTGCAGCTGG AGATCGACCC GGACGAAGTG CAGAATTTGC CGGCCAACAC GAGAGCACAG
ATCAGGGCCT CCACGGTCTT CGGCGCCAAG TACGTCGACT TGATCTATCC CGACGATCCC
GCCATCGCAC GCATCACGGC GGGGACGGCG CTGCAAGCGG TCAACGTCAG CACCGAGGTC
AACACTGTGT TCGAAAACCT CGTCCTCCTG TTGCGACAAA TCGATCCTGC GAAGCTCAAC
GCAACGCTGA CGGCGTTGGC GGAGGGGGTT CGCGGCAAGG GTGAGATCAT CGGGCAGGCG
ACCAGCGACG CGAACGAGGT TCTGCTGGCG GTGAATCCGC GAATGGAAAC CGTGCGTGAG
GACTTCCGGT CGCTGAGCGG ATTCAGCGCC GCCTACAGTG CGGCTGCGCA GAACCTCCTC
AAAAGCCTTT CGGCGGTGAG CACCACAAGT ACGACCATCA CCGCTCACAC CGCGGATCTC
GACGCGCTGC TGCTCAACAT GATCGGATTC TCGCGCAGCG GCACCGATCT CCTGGCGCCG
AACCAGGACA ACCTGGTCCA AGCCATCAAT GGGCTCGAGC CCACGACGAA CCTGTTGATG
AAGTACAACC CCTCCTACAC CTGCATGCTT CTCGGCGCCA CCTGGTTCCT CGACAACGGT
GGACGACATG CCCTCGGTGA GGGGGACGGC CGAACAGGCA TCTTGGACAG CACCTTTCTG
CTCGGCGATG ACGAGTACAA GTACCCGGAG AACCTGCCCG TCATCGGCGC CAAGGGCGGG
CCCGGTGGTA AGCCGGGCTG CGGCTCCCTC CCCGACGCCA GCAAGAGCTA TCCGGTGCGA
CAGATGGTCA CGGACACAGG GTGGGGCACC GGAGGTGGAT TCCGGCCCAA CCCGGGCATC
GGCCACCCGT GGTATGTCAA CTACTTCCCC GTCACACGCG CCGTGCCCGA GCCGCCGAGC
ATTCGTGGCG AAGGGCCGCC CGCACCGGGT CCCGCGCCTG CACCCGGGCC GCTCCCGCTG
CCCGTCGGCC CGCCACCACC TCCGCAGGAC ACGTCAGGAC CGCAGCCGTG A
|
|---|
| Protein sequence | MESSGGERYL GWWTAILLVV IVALMLLSAG LFKGSFRSFV PVTLTSDRSG LIMETGNKVR
FRGVQVGRVG SVTAGTERVS LQLEIDPDEV QNLPANTRAQ IRASTVFGAK YVDLIYPDDP
AIARITAGTA LQAVNVSTEV NTVFENLVLL LRQIDPAKLN ATLTALAEGV RGKGEIIGQA
TSDANEVLLA VNPRMETVRE DFRSLSGFSA AYSAAAQNLL KSLSAVSTTS TTITAHTADL
DALLLNMIGF SRSGTDLLAP NQDNLVQAIN GLEPTTNLLM KYNPSYTCML LGATWFLDNG
GRHALGEGDG RTGILDSTFL LGDDEYKYPE NLPVIGAKGG PGGKPGCGSL PDASKSYPVR
QMVTDTGWGT GGGFRPNPGI GHPWYVNYFP VTRAVPEPPS IRGEGPPAPG PAPAPGPLPL
PVGPPPPPQD TSGPQP
|
|---|
| |