Gene Mjls_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4185 
Symbol 
ID4879891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4422305 
End bp4423618 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content65% 
IMG OID640141494 
Productvirulence factor Mce family protein 
Protein accessionYP_001072448 
Protein GI126436757 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGT TGCGCGGCAG AAGGATCGGC TTGGCGTCGG TCCTGGTGCT GCTGCTGATC 
GCCGGCCTGG TTACGGTGTC GCCCGCGCTG AAGGCCGCCG ACCGGGTCAC CGTCGTCGGG
TACTTCGAGA ACAGCAACGG TCTGTTCGCC GGCGACGAGG TACAGATCCT GGGCGTTCCG
GTCGGCGAGA TCGTCGAGAT CGAACCGCAG CCCGACCGGG TCAAGGTGAT CTTCTGGTAC
GACGCCAGGT ATAAGGTGCC CGCCGACGCC AACGCTGCGG TCCTCTCACC GGCGCTGGTG
ACGGCGCGCG CCGTTCAGTT GACTCCGGCG TACTCGGGCG GCCCGATCAT GCAGGACAAC
GCCGTGATCC CCGAAGATCG CACCGCCGTC CCCGTCGAAT GGGACGATTT CCGTGCGCAA
CTCGACTCGC TCACCGAGAT GCTGCAGCCG AGCGAACCCG GCGGCGTTGC TCCGCTGGGC
GCCTTCATCA ACACGGCCGC GGACAACCTC CGCGGTGAGG GCGCCAACAT CCGCGACGCG
ATCATCAAAT TCTCGCGGGC GATTTCTGCG CTCAGCGACC ACAGCACCGA CATCTTCGGC
ACCGTGAAAA ACCTGTCCAT TCTGGTGGCG GCTCTGCGAG CCAGTTCGGA TCTGATGCAG
CAACTGAACG GCAACCTTGC CGCGGTTACC GCACTGCTGA CAGCAGATCC GGGAGCGGTA
GGTATTGCAA TGCAGGACCT CAACGGCGCA GTGGGCGAGG TCCAGAGCTT TGTGGCCGAG
AACCGGGAAG CACTCGGCGT CACATCGGAC AAGTTGGCGT CCGTCTCCCA GGCGGTCACC
GACAGCCTCG ACGACGTGAA GCAAACGCTG CACATTGCAC CCACGGCGCT CAACAACTAC
AACAACATCT GGCAGCCTGC CCAAGGCGCC TTGTCGGGCG CACTGGTCAT CAACAATTTC
GCCAACACCA TCTCGTTCCT GTGTGGTGCT GTGCAGGCGG CGTCACGGAT GAACGGCGAG
CAATCGGCCA AGCTGTGCGC GCAATACCTC GCTCCGATCA TCAAGAATCG CCAGTACAAC
TTTCCCCCAC TGGGGGAGAA CCTCTTCATC GGCGCCCAGG CCCGGCCGAA CGAGGTGACC
TACAGCGAGG ACCGGCTGCG TCCCGGTCAC ATTCCGCCGG TGCCTGACAC ACCGCCACCG
GCGGTCACCT CAACGCCAGC GGGCAGCGCT CCGTTACTGC CCGCCGAGAC GATCGCCACC
AACCCCGCCG ACGGCCTGCC CGGCTTGATG GTCCCCTCCG GAGACGGGTC GTGA
 
Protein sequence
MTALRGRRIG LASVLVLLLI AGLVTVSPAL KAADRVTVVG YFENSNGLFA GDEVQILGVP 
VGEIVEIEPQ PDRVKVIFWY DARYKVPADA NAAVLSPALV TARAVQLTPA YSGGPIMQDN
AVIPEDRTAV PVEWDDFRAQ LDSLTEMLQP SEPGGVAPLG AFINTAADNL RGEGANIRDA
IIKFSRAISA LSDHSTDIFG TVKNLSILVA ALRASSDLMQ QLNGNLAAVT ALLTADPGAV
GIAMQDLNGA VGEVQSFVAE NREALGVTSD KLASVSQAVT DSLDDVKQTL HIAPTALNNY
NNIWQPAQGA LSGALVINNF ANTISFLCGA VQAASRMNGE QSAKLCAQYL APIIKNRQYN
FPPLGENLFI GAQARPNEVT YSEDRLRPGH IPPVPDTPPP AVTSTPAGSA PLLPAETIAT
NPADGLPGLM VPSGDGS