| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4170 |
|---|
| Symbol | |
|---|
| ID | 4879876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4406035 |
|---|
| End bp | 4407489 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640141479 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001072433 |
|---|
| Protein GI | 126436742 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.826895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.918864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCCA GGAGACACGA CCGCGCACTG CACCCGGCAT GGTGGACGCT GATCCTTCTC
GTGGTGCTGG TCACCATCGT CATGGTGACC TCGGCGATGT TCGCGGGCAC GTTCAAGCGA
TTCGTGCCGG TGACACTCAC CTCGGATCGC TCAGGCCTCG TGATGGAGCC GGGCGGCAAA
GTGAAGCTGC GCGGTGTCGT CGTCGGCCGG GTCAGCGAAA TCACGGGTGG CAACGATCCG
GTCAGGCTGA AGCTGGACCT GTTCCCCGAT CAGATCAAGT ACATTCCCGC CAACGTCGAG
GCGCGCATTC GGGCTACCAC AGCGTTCGGC GCCAAGTACG TCGACCTGAT CTATCCGAGC
GACCCCAGCC CGAAGCGAAT CTCCGCCGGG GCCGTGGTCG CGTCGAAGAA TGTCAGCACC
GAAGTCAACA CCGTTTTCCA GAACCTGACC GGCGTGCTGC AGAAGATCGA CCCGGCCAAG
CTCAACGGTG TCCTCTCGGC CCTGTCGGAG GGTCTGCGCG GCCAGGGGGA GCGGATCGGC
GAAGCGACTA CCGACGCCAA CCAGGTCCTC ATCGCCCTCA ACTCGCGCAC CGACACGGTG
CAACGGGACT GGCAGTCGCT GCGCAACTTC AGTGACACCT ACAGCGTCGC TGCTCAGGAC
ATCGTCACTG TGCTGAACGC GGCGAGCACC ACCAGTGCGA CGATCGCCAA CAACGCGCCG
GCGCTGGACG CCCTGCTGGT CAATCTGCTC GGCTTGTCCA ACAGCGGCAT CGAAGTGCTC
GGTCCGAACA AGGAAAACCT GGTCACCGCC ATCAACACGC TCGAGCCGAC GACGAGCCTG
TTGATGGAGT ACAGCCCGTC GTTCACCTGC ACGCTCGTCG GAGGTAAGTG GTTCCTGGAC
AACGGCGGCT ACAAGTGGGG GGGCGGCCAG AACGGCAAGT CGGCGATTCT GGACACCGCC
ATCCTGCTCG GTGACGACCC CTACCGATAC CCCGACAACC TCCCGATCGT CGGCGCCAAG
GGCGGACCGG GCGGCAAGCC CGGCTGCGGG GGACTCCCGA TCGTCGACGA CGACTGGCCG
GTCCGCCACC TGGTCACCAA CACCGGCTGG GGCACCGGGC TGGACCTGCG GCCCAATCCT
GGCATCGGGT TCCCCGGGTG GGCCAACTAC TTCCCCGTCA CCCGCGGCGT GCCCGAACCG
CCGAGCATTC GCTATCCGGG TGGCCCGGCG CCGGGACCGA TCCCGTACCC GGGTGCCCCG
CCCTACGGCG CACCGCAGTA CGCGCCCGAC GGAACTCCGC TGTACCCGGG TCTGCCGCCG
GCTCCACCGC CGGGGGCGCC GCGGGATCCG GGGCCCCCAC CGCCGGGGGC GGAGCCGTTC
GTCGTGCCGC ATCCGGCGCT GGGGCAACCC ACCCCAACCC CCCTGCTGCC CGAGGCCGTC
ACACCGTCGC CGTGA
|
|---|
| Protein sequence | MESRRHDRAL HPAWWTLILL VVLVTIVMVT SAMFAGTFKR FVPVTLTSDR SGLVMEPGGK
VKLRGVVVGR VSEITGGNDP VRLKLDLFPD QIKYIPANVE ARIRATTAFG AKYVDLIYPS
DPSPKRISAG AVVASKNVST EVNTVFQNLT GVLQKIDPAK LNGVLSALSE GLRGQGERIG
EATTDANQVL IALNSRTDTV QRDWQSLRNF SDTYSVAAQD IVTVLNAAST TSATIANNAP
ALDALLVNLL GLSNSGIEVL GPNKENLVTA INTLEPTTSL LMEYSPSFTC TLVGGKWFLD
NGGYKWGGGQ NGKSAILDTA ILLGDDPYRY PDNLPIVGAK GGPGGKPGCG GLPIVDDDWP
VRHLVTNTGW GTGLDLRPNP GIGFPGWANY FPVTRGVPEP PSIRYPGGPA PGPIPYPGAP
PYGAPQYAPD GTPLYPGLPP APPPGAPRDP GPPPPGAEPF VVPHPALGQP TPTPLLPEAV
TPSP
|
|---|
| |