Gene Mjls_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4084 
Symbol 
ID4879792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4315163 
End bp4316809 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content65% 
IMG OID640141395 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001072349 
Protein GI126436658 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.715541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.397741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTACG TGATCACACA GAACTGCTGC AAGGACGCCA GCTGTGTGCC GGTGTGTCCG 
GTCGACTGCA TCCGTCCCGC GGGGGAAGCG GGGCAGTTCG TCGGTACCGA GATGCTCTAC
ATCGACCCGG AGACGTGTAT CGACTGCGGG GCATGTCTGG AGGAGTGCCC GGTCGACGCG
ATCTATTACG ACGAGGATCT TCCTGCCGAC CAGGAGAGGT TCCGCGAGAT CAACGCCAGC
TATTTCCAGC GGCATCCGTT GGCGCCGGCA GTCTCGTCCC CCGCGGTCCA ACATGGTGGC
GTCGCCGCCG GTTCGTTCCA GGTGGCGATC GTCGGCGCCG GCCCCGCGGC GTGCTACGCC
GCGAGTGAGC TGCTGCGGGT CGATGGCGTG GAAGTAAACC TCTTCGAGCG CCTACCCACT
CCGTTCGGAC TCATCAGGGC CGGCGTGGCT CCTGATCATC AACGCACCAA ATCTGTCACG
CGCATCTTCG ACGCCGCGTT GAGCAATCAG CGGATGGGCT GCTACCTCAA TGTGGAGGTG
GGCTCCCAGC TGAGCCACGA CGACCTGCTG GCCCACCACC ATGCAGTGAT CTACGCGGTC
GGTGCGTCCC GGAGCCGGGA CCTCGGCATT CCCGGCGACG ATCTGCCGGG TAACGATGCA
GCCTCGGACT TCGTCGGGTG GTACAACGGC CATCCCGACC ACGTGAACCG TCAATTCGAT
CTGTCAGCCG AACGTGCGGT CATCGTCGGC AACGGCAATG TCGCACTGGA TGTGGCGCGG
ATACTTCTGA TGGCACCGGA AGATCTGGCC CAGACCGACA TCGCCCAACA TGCCTTGGAG
GCTTTGTCGC GCAGCGAGAT CCGAGAGGTG GTCATCCTGG GCCGGCGCGG TCCGCGGGAC
AGTGCGTTCT CGGCGGGGGA GTTCCTTGCC CTCGGTCACC TGCCCGGGAT CGACATCGTG
ATCGACAGCG ACGAGTTGGA GGCGAACTCC GAAGACGACG TCGAGACGAC GCTGAAATTG
GACATCGCGC GGGAGTATGC GAGCCGACAA CCGTCGCCTG CGAACAAGCG AATCGTGTTC
CGGTTCCTGA GATCGCCGGT CGAGGTGGTC GGTGACGGGC GGGCCGAAGG ACTCCGCGTC
GTGCGCAACA GCCTCGACGA GAACGGCGGA CTCGTAACGG GCTCGCCCGA CGCAGAGAGC
GAGCTCATCG AGACCTCGCT GATCCTGCGC TCGATCGGGT ACCAGGGGTC TGCCGTCGAA
GGCCTGCCGT TCGATCCAGT GAAAGGCATC GTGCCCAACG ACCGTGGCCG CGTCATCGAC
GACGACGGTC AGCCCGTGGC GGGGGCCTAC GTGACGGGGT GGATCAAGCG CGGGGCCAGA
GGTGTCATCG GGACCAACCG GACATGCGCA CAGGAGACGG TGGCCCACCT GTGGACGGAC
TATGACGACG GCAAGCTGTC TCGCGAGGTG AAAGACCGGG CGGCCCTACG CGAGCTGCTC
AAGGACCGCG GCGTCGATCC AGTCGACTGG CGGGGCTGGC GCGCGATAGA CGCCGCGGAA
CGCAAGCGTG GCGCCGAAGG GTCGCGCCCG CGGCTCAAGT TCGTCGATAT CGCCGAGATG
ATCCATGCCG CCAAGGTCGG CGGCTAG
 
Protein sequence
MAYVITQNCC KDASCVPVCP VDCIRPAGEA GQFVGTEMLY IDPETCIDCG ACLEECPVDA 
IYYDEDLPAD QERFREINAS YFQRHPLAPA VSSPAVQHGG VAAGSFQVAI VGAGPAACYA
ASELLRVDGV EVNLFERLPT PFGLIRAGVA PDHQRTKSVT RIFDAALSNQ RMGCYLNVEV
GSQLSHDDLL AHHHAVIYAV GASRSRDLGI PGDDLPGNDA ASDFVGWYNG HPDHVNRQFD
LSAERAVIVG NGNVALDVAR ILLMAPEDLA QTDIAQHALE ALSRSEIREV VILGRRGPRD
SAFSAGEFLA LGHLPGIDIV IDSDELEANS EDDVETTLKL DIAREYASRQ PSPANKRIVF
RFLRSPVEVV GDGRAEGLRV VRNSLDENGG LVTGSPDAES ELIETSLILR SIGYQGSAVE
GLPFDPVKGI VPNDRGRVID DDGQPVAGAY VTGWIKRGAR GVIGTNRTCA QETVAHLWTD
YDDGKLSREV KDRAALRELL KDRGVDPVDW RGWRAIDAAE RKRGAEGSRP RLKFVDIAEM
IHAAKVGG