| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4019 |
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| Symbol | |
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| ID | 4879727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 4250623 |
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| End bp | 4251444 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640141330 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001072284 |
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| Protein GI | 126436593 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.713982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGAA TGGACGGGCG CGTCGCCTTC ATCACCGGCG CAGGTAAGGG CCAGGGCAGG
TCGCACGCCG TTCGGCTGGC CGAGGAGGGC GCCGACATCG TGGGCGTGGA CATCTGCCGC
CAACTCGACG GCGTGATGTA CGCGATGGCA ACCCCCGAGG ACCTGGACGA GACCGTCAAC
CTGGTGGAGA AGACCGGCAG GCGGATGATC GCCCGCCACG CCGACGTCCG GGACCGCAAG
GCGCTGCAGT CCGCGTTCGA CGACGGTGTC GAGGAGTTCG GCTACATCGA CACGGTGGTG
GCCAATGCCG GCATCGTGCT CAACCGCGTC GATGAGCCCG ACCCCGAGGC GGCATGGGAG
CTCGGCATCG GCGTGCTGCT CACCGGGGTG TGGAACACCC TGCAGATCGC CAGCGCCCAC
ATGGTGGAGT CCGACCGTGG TGGCGCGATC GTCGCTACCA GTTCGATGGC CGGGTTGAAG
GCGCTGACCG ACGGAAGCGG TGGTGCGGAC GCGTATGCCG CGGCGAAGAT CGGCGTCACC
GGGCTGGTCC GAGCATACGC TCAACGGCTG GCGGCCAAGA ACATTCGCGT CATGGCGATC
GCGCCGACGG GAGTCAACAC CGCCATGATC GTGGAGAACC CGGCGCTCTT CGAAGTGATC
GCGGCGCATG AGCACTTGGC CAAGGCGATG ACCAACGCGC TACCCGTCCA GGTCATCGAA
CCGGCCGACG TATCGGAGAC GGTGTTGTTC CTCGTCAGCG ACAGCGGCAA GTACTACACC
GGCACCACGT TGATGCTCGA CGCCGGTATG AACATGACCT GA
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| Protein sequence | MGRMDGRVAF ITGAGKGQGR SHAVRLAEEG ADIVGVDICR QLDGVMYAMA TPEDLDETVN
LVEKTGRRMI ARHADVRDRK ALQSAFDDGV EEFGYIDTVV ANAGIVLNRV DEPDPEAAWE
LGIGVLLTGV WNTLQIASAH MVESDRGGAI VATSSMAGLK ALTDGSGGAD AYAAAKIGVT
GLVRAYAQRL AAKNIRVMAI APTGVNTAMI VENPALFEVI AAHEHLAKAM TNALPVQVIE
PADVSETVLF LVSDSGKYYT GTTLMLDAGM NMT
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