Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3997 |
Symbol | |
ID | 4879706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4229425 |
End bp | 4230822 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640141309 |
Product | extracellular solute-binding protein |
Protein accession | YP_001072263 |
Protein GI | 126436572 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.110997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.433481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGCTC GGCGGCTCTG TGCTGCAGCA GTCACCGCGC TGACGACCGC GTCGATGGTT TCGGCGTGTG GATCCGGCGG CGGTGGGCTG GTCATCAACT ACTACACCCC GGCGAACGAG GCGGCGACGT TCACCGCCGT CGCCAACCGC TGTAACGAAG AACTGGGTGG CCGGTTCCGG ATCGAACAGC GCAACCTGCC GAAGGGCGCC GACGACCAGC GCCTGCAGCT GGCGCGCCGG CTCACCGGCA ACGACACCTC ACTGGACGTG ATGGCGCTCG ACGTGGTCTG GACCGCCGAA TTCGCCGAAG CAGGCTGGGC GCTGCCGCTC TCGGACGATC CGGCCGGACT TGCCGAGGCC GATGCCACCG CCAACACGCT GCCCGGACCC CTTGAGACCG CGAAATGGCA GGACAAGCTC TACGCGGCGC CGATCACCAC CAACACCCAG TTGTTGTGGT ACCGGGCCGA TCTCATCCCC CAACCGCCTA CGACGTGGGA CGGGATGGTC GCTGAGGCCA CCCGGTTGCA TGCCGCGGGT GGTCCGAGTT GGATCGCGGT GCAGGGCAAG CAGTACGAGG GCCTGATGGT CTGGTTCAAC ACGCTACTGG AGAGCGCCGG CGGGCAGGTG CTCTCCGACG ACGGTGAGCG TGTCACCTTG ACCGACACCC CGGAGCACCG AGCCGCCACG GTCAAGGCGC TGCAGATCAT CAAGTCTGTG GCGACCGCCC CGGGGGCGGA TCCGTCGATC ACCCAGACCG ACGAGACGAC CGCACGCCTC GCGCTCGAGC AGGGCAAGGC CGCGCTCGAG GTCAACTGGC CCTACGTGCT GCCGTCGCTG CTGGAGAACG CCGTCAAGGG TGGCGTGCCG TTCCTGCCGC TGAATCAGGA CCCGTCGCTG ACCGGGGCGA TCAACGACGT GGGCTCTTTC TCACCGAGCG ACGAGCAGTT CCGGACCGCC TTCGACGCGA GCCGGCCCGT GTTCGGCTTC GCGCCGTATC CCGGGGTGCA ACCCGGCGAC CCGGCGCGGG TCACGCTGGG CGGTCTGAAC CTGGCCGTGG CCAGGACGAC CCAGCACCGC GCCGAGGCCT TCGAGGCGAT CCGGTGCCTG CGCAACGTCG AGAACCAGCG GTACACCTCG GTCGAGGGTG GACTACCCGC GGTGCGGGCG TCGCTGTACG ACGATCCGGC GTTCCAGGCG AAATACCCGC AGTACGAGAT CATCCGCGAT CAGTTGACGA ACGCCGCGGT CCGGCCGGCC TCACCGGTGT ACCAGGCGAT GTCGACGCGG ATCACGGTGA CGCTGGCACC GATATCGGAC ATCGATCCGG AACGGACCGC CGATGAACTC ACCGAGCAGG TCCAGAAGGC CATCGACGGC AAGGGGTTGA TCCCGTGA
|
Protein sequence | MRARRLCAAA VTALTTASMV SACGSGGGGL VINYYTPANE AATFTAVANR CNEELGGRFR IEQRNLPKGA DDQRLQLARR LTGNDTSLDV MALDVVWTAE FAEAGWALPL SDDPAGLAEA DATANTLPGP LETAKWQDKL YAAPITTNTQ LLWYRADLIP QPPTTWDGMV AEATRLHAAG GPSWIAVQGK QYEGLMVWFN TLLESAGGQV LSDDGERVTL TDTPEHRAAT VKALQIIKSV ATAPGADPSI TQTDETTARL ALEQGKAALE VNWPYVLPSL LENAVKGGVP FLPLNQDPSL TGAINDVGSF SPSDEQFRTA FDASRPVFGF APYPGVQPGD PARVTLGGLN LAVARTTQHR AEAFEAIRCL RNVENQRYTS VEGGLPAVRA SLYDDPAFQA KYPQYEIIRD QLTNAAVRPA SPVYQAMSTR ITVTLAPISD IDPERTADEL TEQVQKAIDG KGLIP
|
| |