Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3985 |
Symbol | |
ID | 4879694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4215179 |
End bp | 4216498 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640141297 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001072251 |
Protein GI | 126436560 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.675837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.216799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAT CCCCGCACGT GGACGAGAAC CCTGCCCTCA GCGCGCCGGT GCCCGTCGCG CCGAGCCGGG CGCGGATGAT CGCGGTGCTC GGCGCTCTCG TCGCGCTCGG TCCGCTCACC ATCGACATGT ATCTGCCCGC GTTGCCGAGC ATCGCCGACG AACTGAGCGT GTCCTCGTCG GTCGCGCAGC TCACGCTTAC CGGAACCCTG GCGGGCCTGG CGCTCGGCCA GCTGCTGGTG GGTCCGCTGT CGGATTCCCT CGGGCGGCGA CGCCCCCTGA TGGCCGGGAT CGTGCTGCAC ATGCTGGCGT CGGTGCTGTG CATGCTCGCG CCCGACATCA CCGTGTTGGG TGTGGCGCGC GGGTTGCAGG GGATGGGCGC TGCCGCCGCG ACCGTGGTGG CGATCGCCGT CGTCGGCGAC CTGTTCTCCG GGACCGCCGC GGCGACGGTG ATGTCGCGGC TGATGCTCGT CCTGGGCGTC GCGCCGGTGC TGGCGCCGTC GCTGGGCGCG GCGGTGCTGC TGCACGCGTC GTGGCAGTGG GTGTTCGCCG CGCTGGTCGT CCTCGCCGGC GGGTTGCTCC TGGTGGCGGC CCTGGTGCTG CCGGAGACCC TGCCGGTGGC GCACCGCCGT CCGCTGAAGG TGCGCGGCAT CGCCGACACC TACGCCTCGC TGCTGCGCGA CCCGCGGTTC GTGGTGCTGG TGCTGGTGGC GGCACTGGGC ATGTCCGGAC TGTTCGCCTA CATCGCCGGC GCGGCGTTCG TGCTGCAGGG TGACTACGGG CTGGACCAGC AGACCTTCGC GCTGGTGTTC GGCGCCGGGG CGGTCGCCCT GATCGGCACC ACGCAGTTCA ACGTGGTGCT GCTGCGCCGG TTCGCACCGC AGCAGATCAT GGTGTGGGCG CTGGCCGTGG CGTCGCTGGC CGGTGTCGTC TTCGTCGGTC TGACGGTCGC CCACGTCGGT GGTCTGACCG GGTTCCTGGT GTCGGTGTGG ACCATCCTCG CCGCGATGGG CCTGGTGCTG CCGAACGCGC CGGCCGTCGC GCTGTCGCGG CACAACGAGG CCGCCGGCAC GGCGGCGGCC CTGCTCGGCG CCGGGCAGTT CGGGCTCGGT GCGGCGGTGG CGCCGTTGGT CGGCGTGCTC GGCAACGACG AGTTCGCGCT CGCCCTGGTC ATGACGGTCG GTACGGTCGT GGCGCTGGTC GCGCTGATGG CGGTGGGGCT GCGCGGCAAC CGCGAGGACT CCGACGATGC CGACGAGGTC ACCGACGACC CCGTCGAGGT CGCCGACGGG GCCCTGGCGA GCGCCGCCGA ACCCGCCTGA
|
Protein sequence | MATSPHVDEN PALSAPVPVA PSRARMIAVL GALVALGPLT IDMYLPALPS IADELSVSSS VAQLTLTGTL AGLALGQLLV GPLSDSLGRR RPLMAGIVLH MLASVLCMLA PDITVLGVAR GLQGMGAAAA TVVAIAVVGD LFSGTAAATV MSRLMLVLGV APVLAPSLGA AVLLHASWQW VFAALVVLAG GLLLVAALVL PETLPVAHRR PLKVRGIADT YASLLRDPRF VVLVLVAALG MSGLFAYIAG AAFVLQGDYG LDQQTFALVF GAGAVALIGT TQFNVVLLRR FAPQQIMVWA LAVASLAGVV FVGLTVAHVG GLTGFLVSVW TILAAMGLVL PNAPAVALSR HNEAAGTAAA LLGAGQFGLG AAVAPLVGVL GNDEFALALV MTVGTVVALV ALMAVGLRGN REDSDDADEV TDDPVEVADG ALASAAEPA
|
| |