| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3984 |
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| Symbol | |
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| ID | 4879693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 4213150 |
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| End bp | 4215090 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640141296 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001072250 |
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| Protein GI | 126436559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.086459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.10455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCA CGTCCGAAGC GCGACCGGTG ACCGGTGACC CATGGCATGC GCTGTGGGCC
ATGATGGTCG GCTTCTTCAT GATCCTGGTC GACGCCACCA TCGTGGCGGT CGCCAACCCG
GTGCTCATGG AGAAGATGGG CGCCGACTAC GACGCGGTGA TCTGGGTGAC CAGCGCCTAT
CTGCTGGCCT ACGCGGTCCC GCTGCTGGTG GCGGGTCGGC TGGGGGACCG GTTCGGGCCC
AAGAACGTCT ACCTGGTCGG TCTGGCCGTC TTCACCGCCG CCTCGCTGTG GTGCGGGCTG
GCCGGGTCCA TCGACACGCT GATCGCCGCG CGGGTCGTCC AGGGCGTCGG CGCGGCGCTG
CTGACGCCGC AGACCCTGTC GACGATCACC CGCATCTTCC CGCCCGAGCG GCGCGGTGTG
GCGATGAGTG TGTGGGGTGC GACGGCCGGG GTGGCCACGC TGGTGGGGCC ACTGGCGGGT
GGCGTGCTGG TGGACCACCT CGGTTGGCAG TGGATCTTCT TCGTCAACGT GCCGGTCGGG
GTGGCGGGCC TTGCATTGGC GTTCTGGCGG GTGCCCGCGC TGACCACCAC CGCGCACCGG
TTCGACCTGC TCGGGGTGCT GCTGTCCGGG GTCGGGATGT TCGCGATCGT CTTCGGGCTG
CAGGAGGGGC AGTCCCACGG TTGGCAGCCC TGGATCTGGG TGGTCATCGT GGCCGGCGTC
GCGGTGATGG CCGGGTTCGT CTACTGGCAG TCGGTCAACC CCCACGAACC GTTGATCCCG
TTGCGGATCT TCGGTGACCG CGACTTCTCG CTGTCCAGCT TCGGCGTCGC CGTCATCGGC
TTCGTGGTGA CCGGCATGAT CGTGCCCGCG ATGTTCTTCG CCCAGGCGGT GTGTGGGCTG
TCGCCGACCG AGTCGGCGCT GCTGACCGCG CCGATGGCGA TCGCCAGTGG AGTGCTGGCA
CCCGCGGTCG GGCGCATCGT CGATCGCGCC CATCCGCGAC CGATCGTCGG GTTCGGGTTC
TCGGCGCTGG CGATCGGGCT GACCTGGTTG TCGATCGAGA TGACGCCGGA TACCCCGATC
TGGCGGCTGG TCCTGCCGTT CCTCGTAATG GGTATCGGTA TGGCGTTCAT CTGGTCGCCG
CTGGCGGCCA CCGCGACCCG GAATCTGGCA CCGCATCTCG CCGGCGCCGG GTCCGGCGTC
TACAACGCGA CGCGTCAGGT CGGGTCGGTG CTGGGCAGCG CCGGCATGGC GGCGTTCATG
ACGTCGCGGA TCAGCGCGGA GATGCCGTCG GCGCAGGGCG GGGCGCCGCG CGGGGAGGGG
GCGGTGTCGG CGCTCCCCGA ATTTCTCCAG GTGCCGTTCG CCGCGGCGAT GTCGCAGTCG
CTCCTGCTGC CGGCGTTCGT GGCGTTGATC GGGGTGGTCG CGGCGATCTT CCTGCGCGGC
TTCGGCGGGG CATCGGCGCC GGTTGTCGCC GCGCCGGTGG CGCGCGCCGA CCACCGGGAC
GACTCCGTCG ACGACAGCCA CGGCTATGAC GACGACGACT ACCTCGAGTA CGCGGTCAGC
TGGGACGACC TTCAGTTCAC CGAACCCATC TCGACCCGTC CTGAGGTCGG CGCCGACGAC
AGTGTCACGG CGCCTCTGGC AACGCGGGGC CGTCGCGCGG AGGCGGCCGC CGAGCCGTCC
GGTGCCGACG ATCCGTGGCG GCGTGTGCTC GACGAACTGC TACCGGAGCC GCCGGCCCGG
CCCGCGGCCG AACCGATCGG CTTCGCGCAC AACGGTTTCC ACGTCGAGGG AGAGGAGACG
CCGGTCGACG ACAGACGGGG CCGGCGATAC CGAGACGACG GCGACGCTGC ACCCGCATGG
CTGCGCGAGT TCGGTGAACG CTCGCGCCGC GGAACGGACA CCCCCTCCGG CGGCCGTCAT
TCACGCCGCG ACGGCGACTG A
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| Protein sequence | MFSTSEARPV TGDPWHALWA MMVGFFMILV DATIVAVANP VLMEKMGADY DAVIWVTSAY
LLAYAVPLLV AGRLGDRFGP KNVYLVGLAV FTAASLWCGL AGSIDTLIAA RVVQGVGAAL
LTPQTLSTIT RIFPPERRGV AMSVWGATAG VATLVGPLAG GVLVDHLGWQ WIFFVNVPVG
VAGLALAFWR VPALTTTAHR FDLLGVLLSG VGMFAIVFGL QEGQSHGWQP WIWVVIVAGV
AVMAGFVYWQ SVNPHEPLIP LRIFGDRDFS LSSFGVAVIG FVVTGMIVPA MFFAQAVCGL
SPTESALLTA PMAIASGVLA PAVGRIVDRA HPRPIVGFGF SALAIGLTWL SIEMTPDTPI
WRLVLPFLVM GIGMAFIWSP LAATATRNLA PHLAGAGSGV YNATRQVGSV LGSAGMAAFM
TSRISAEMPS AQGGAPRGEG AVSALPEFLQ VPFAAAMSQS LLLPAFVALI GVVAAIFLRG
FGGASAPVVA APVARADHRD DSVDDSHGYD DDDYLEYAVS WDDLQFTEPI STRPEVGADD
SVTAPLATRG RRAEAAAEPS GADDPWRRVL DELLPEPPAR PAAEPIGFAH NGFHVEGEET
PVDDRRGRRY RDDGDAAPAW LREFGERSRR GTDTPSGGRH SRRDGD
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