| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3983 |
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| Symbol | |
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| ID | 4879692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 4209743 |
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| End bp | 4213174 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640141295 |
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| Product | RecB family-like nuclease |
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| Protein accession | YP_001072249 |
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| Protein GI | 126436558 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0895851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGTCG AATCCGTTGG GGCGCACGAC GAGGCCATCT ACAGCGCTTC GGATCTGGCC
GCCGCCGCGC GCTGCGAGTA CGCGCTGCTG CGTTCATTCG ACGCCCGGCT GGGATGGGGT
CCGTCCGTGG CCACCGAGGA CGAGCTGCTG GCCCGCACCG CCGACCTGGG TGACGAACAC
GAGAAGCGCC ACCTCGACAC ACTGAGGACC GACAGCGACC ACAACGTCAC CGTCATCGGC
AGGCCGCCCT ACACCGTGGC CGGGCTGACC GCCGCCGCCG AGGCCACCAC CCGCGCCGTC
GCCCGCCGCG CCCCGGTGAT CTACCAGGCC GCGATGTTCG ACGGCCGGTT CGCCGGTTTC
GCCGACTTCC TGATCCTCGA GGGCGACCGC TACCTGCTGC GCGACACCAA GCTGGCGCGT
TCGGTGAAGG TCGAGGCGCT GCTGCAGCTG GCCGCGTACG CCGAGGCGCT GACCGCGGCG
GGGGTGCCGG TCGCCGACGA GGTGGAGCTC GTGCTCGGCG ACGGGGCCAC CGCCCGCTAT
CCGCTCGAGG AACTGCTGCC GGTGTACCGG CCGCGGCGGG CCGCGCTGCA GCGGCTGCTC
GACGACCATC TCGCCGGCGG GACGCCGGTG CGCTGGGAGG ACGAGACCGT CCGGGCGTGT
TTCCGCTGTC CGGAGTGCAG CATCGAGGTG CGCGCACAGG ACGACCTGCT GCTCGTCGCG
GGCATGCGGG TCAGCCAGCG CGCCCGGTTC CACGAGGCGG GGATCACCAC CGTGGCCGAA
CTCGCCGCGC ACCAGGGTCC GGTGCCGGAA CTGCCGGCGC GCACCGTCAC CGCGTTGAGC
GCCCAGGCCC GGCTGCAGAC CGCACCGCGC GTCGACGGCA AACCGCCCTA CGAGGTCGCC
GATCCGCAGC CGCTGATGCT GCTCCCCGAA CCCGACAAGG GTGACCTCTT CTTCGATTTC
GAGGGCGACC CGTTGTGGAC CGACGACGGC CACGAGTGGG GCCTGGAGTA CCTGTTCGGT
GTGCTCGACA CCGCCGACGG GTTCCACCCG CTGTGGGCGC ATGACCGGCC GCAGGAACGG
AAGGCGCTCG AGGACTTCCT CGAGTTGGTG CGCAAGCGGC GCAAACGCCA TCCGAACATG
CACATCTACC ACTACGCCGC ATACGAGAAG ACCGCGCTGC TGCGCCTCGC CGGGCGCTAC
GGCGTCGGTG AGGACGCGGT CGACGACCTG TTGCGCAGCG GGGTGTTGGT CGACCTGTAC
CCGTTGGTGC GCAAGAGTTT TCGCATCGGC ACCGAGAACT ACAGCCTCAA GTCACTGGAG
CCGCTGTACA TGGGTGGGCA GCTGCGCACC GGGGACGTGA CCACGGCCGC GGCGTCGATC
ACCGAGTACG CCCGCTACTG CGAGCTGCGC GCCGAGGGCC GTGACGACGA CGCCGCCGTC
GTCCTCAAGG ACATCGAGGA CTACAACCGT TACGACTGCA CCTCGACGCG CAAACTGCGC
GACTGGCTGG TGTGCCGGGC CATCGACTGC GAGGTGCCGC CGCGGGGGCC GCAGCCGGTC
CGCGACGGCG CCGAGCCCGA ACCCGTCGAC GCCCTCGACC GCACGCTGTG CCGTTACGCG
GGCGACGAAC TGGAGGGCCG CACCCCGGAG CAGTCGGCGG TCGCGATGGT CGCCGCCGCC
CGCGGCTACC ACCGTCGCGA GGACAAACCG TTCTGGTGGT CGCATTTCGA CCGGCTCAAC
AACCCGGTCG ACGAATGGGC CGACAGCACC GACGTCTTCC TCGTCGACCC CGGCGGCGCA
CAGGTCGAGG TGGATTGGCA CACGCCGCCG CGGGCCCGCA AACCGCAGCG CCGGGTCCGG
TTGAGCGGCG CGATGGCCGC CGGCGGGCTC AGCCGCGACA TGTACGCCCT CTATGAACCG
CCCGCCCCGG CCGGGCTCGG CGACGATCCG GACCGTCGCG CGGCGGGCAG CGTCACCGTC
GTCGAGTGCA ACGCCCCCGA CGTCCCCACC GAAGTGGTCG TCGTCGAGCG CACCCCACGG
GACGGCGGGG TGTTCGACCA GTTGCCCTTC GCGCTGGCGC CGGGGCCGCC GATCCGCACG
ACCGCGCTGC GTGAATCGAT CGAGGCGACG GCCGCCGACC TGGCCGAGCG CCTCCCCCGG
CTACCCGAAA CCGCGGTCAC CGACATCCTG CTGCGCCGCC CGCCGCGGAC CCGCAGCGGC
GCCCCACTGC CCACCGGGCC CGACGTCTCG GCCGCGATCA CCGCCGCGCT GCTCGACCTC
GACTCGTCCT ACCTGGCCGT GCACGGCCCA CCCGGCACCG GCAAGACGTT CACCGCGGCG
GCCATCATCG CGACGCTGGT CAACACGCAC GGCTGGCGGA TCGGGGTGGT GGCGCAGTCA
CATGCGGTGG TGGAGAACCT CTTCCGCGGG GTCATGGACG CGGGGGTGGA CGCGGCGCGG
GTGGCCAAGA AACGGGGGCA CGGCGACGAC GCCAACTGGA CCGTACTCGA GGAGGCGGGG
TTCCCCGGCT TCGTGGCGGA CCGCGACGGT TGCGTGATCG GCGGCACCGC TTGGGATTTC
GCGAACGGCA ACCGGATTCC GCGCGGCTGC CTCGACCTGC TCGTCATCGA GGAGGCCGGG
CAGTTCTGCC TGGCCAACAC GATCGCTGTG GCGCCGGCGG CGGCGAATCT GCTGCTGCTC
GGTGACCCGC AACAGCTACC CCAGGTCAGC CAGGGCACGC ACCCCGAACC GGTCGACACC
TCCGCGCTGG GGTGGCTGGT CGACGGTGCG CACACGCTGT CCGCCGAACG CGGCTACTTT
CTCGACGTGT CCTGGCGGAT GCATCCGGCG GTGTGCGCGG CGGTGTCCCG GCTGTCCTAC
GACGGGCGGC TGCAATCGAA TGAGGCGGTG ACCACCGCGC GCACGCTCGA GGGCTGGTCA
CCCGGGGTGC ACGAGGTGAC CGTGCCCCAC GACGGCAACG CCACCGAAAG CCCGGAGGAG
GCCGACGCGA TCATCGCGCG GATCGGCAGG TTGCTCGGTT CGGTGTGGAC CGACGAGAAG
GGTTCCCGAC CGCTCGCACA GGACGACGTG ATGGTGGTGA CGCCGTACAA CGCCCAGGTG
GTGCTGCTGC GCCAACGTCT CGACGCGGAA AGGCTGACCG ACGTGCGGGT GGGGACAGTC
GACAAATTCC AGGGCCAGCA GGCGCCGGTG GTGTTCATCT CCATGGTGGC GTCCTCGATC
GACGACGTGC CGCGGGGAAT CTCGTTCCTG CTCAACCGGA ATCGGCTCAA CGTGGCGATC
AGCCGCGCGA AGTACGCCGC CGTGGTCGTG CGCTCGGAGG CCCTCACCGA GTACCTGCCT
TCCACGCCGA AGGGACTGGT CGAACTCGGC GCGTTCCTGT CGTTGAGTCA GTCGCCGTCG
CGGCGTGAAT GA
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| Protein sequence | MFVESVGAHD EAIYSASDLA AAARCEYALL RSFDARLGWG PSVATEDELL ARTADLGDEH
EKRHLDTLRT DSDHNVTVIG RPPYTVAGLT AAAEATTRAV ARRAPVIYQA AMFDGRFAGF
ADFLILEGDR YLLRDTKLAR SVKVEALLQL AAYAEALTAA GVPVADEVEL VLGDGATARY
PLEELLPVYR PRRAALQRLL DDHLAGGTPV RWEDETVRAC FRCPECSIEV RAQDDLLLVA
GMRVSQRARF HEAGITTVAE LAAHQGPVPE LPARTVTALS AQARLQTAPR VDGKPPYEVA
DPQPLMLLPE PDKGDLFFDF EGDPLWTDDG HEWGLEYLFG VLDTADGFHP LWAHDRPQER
KALEDFLELV RKRRKRHPNM HIYHYAAYEK TALLRLAGRY GVGEDAVDDL LRSGVLVDLY
PLVRKSFRIG TENYSLKSLE PLYMGGQLRT GDVTTAAASI TEYARYCELR AEGRDDDAAV
VLKDIEDYNR YDCTSTRKLR DWLVCRAIDC EVPPRGPQPV RDGAEPEPVD ALDRTLCRYA
GDELEGRTPE QSAVAMVAAA RGYHRREDKP FWWSHFDRLN NPVDEWADST DVFLVDPGGA
QVEVDWHTPP RARKPQRRVR LSGAMAAGGL SRDMYALYEP PAPAGLGDDP DRRAAGSVTV
VECNAPDVPT EVVVVERTPR DGGVFDQLPF ALAPGPPIRT TALRESIEAT AADLAERLPR
LPETAVTDIL LRRPPRTRSG APLPTGPDVS AAITAALLDL DSSYLAVHGP PGTGKTFTAA
AIIATLVNTH GWRIGVVAQS HAVVENLFRG VMDAGVDAAR VAKKRGHGDD ANWTVLEEAG
FPGFVADRDG CVIGGTAWDF ANGNRIPRGC LDLLVIEEAG QFCLANTIAV APAAANLLLL
GDPQQLPQVS QGTHPEPVDT SALGWLVDGA HTLSAERGYF LDVSWRMHPA VCAAVSRLSY
DGRLQSNEAV TTARTLEGWS PGVHEVTVPH DGNATESPEE ADAIIARIGR LLGSVWTDEK
GSRPLAQDDV MVVTPYNAQV VLLRQRLDAE RLTDVRVGTV DKFQGQQAPV VFISMVASSI
DDVPRGISFL LNRNRLNVAI SRAKYAAVVV RSEALTEYLP STPKGLVELG AFLSLSQSPS
RRE
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