| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3978 |
|---|
| Symbol | |
|---|
| ID | 4879687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4202925 |
|---|
| End bp | 4205306 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640141290 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001072244 |
|---|
| Protein GI | 126436553 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0573144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CGTCACCCCA GAACACCGGA CAGCAGGCAG CGGCCGCGGT GCGGCGCGAC
GTGCTTCCGA TCCCGGATCC CCGACACGTC GGGTTGACGA CGTACGACGC GAAGGATCCG
AATACGACGT ATCCGCCGAT CACGCGGCTG CGCCCACCCG ACGGTGCGCC GAATGTGCTG
ATCGTGCTGA TCGACGACGT GGGTTTCGGC GCGAGTTCGG CCTTCGGCGG CCCGTGCCGC
ACACCGGTCG CGGAGCGGCT GGCGGCCAAC GGTGTGAAAC TCAACCGCTT CCACACCACC
GCGCTGTGCT CGCCGACGCG CCAGGCGCTG CTCACCGGAC GCAACCACCA CTCGGTGGGG
ATGGGCGGTG TCACCGAGAT CGCGACGTCC GCGCCGGGAT ACAGCAGCAT CCGGCCGAAG
GACAAGGCGC CGATCTCGGA AACGCTTCGG CTCAACGGAT ACTCGACGAG TCAGTTCGGC
AAGTGCCACG AGGTCCCGGT GTGGGAGGTG TCGCCGGTCG GGCCGTTCGA CCAGTGGCCC
ACCGGGTCGG GGTTCGAGCA CTTCTACGGG TTCGTCGGCG GCGAGGCCAA CCAGTACTAC
CCCGGACTGT ACGAGGGCAC CACACCCGTC GAACCGGCCA AGACGCCCGA GCAGGGTTAC
ACCCTGACCG AGGACCTCGC CGACCGGGCG ATCACCTGGG TGCGCCAACA GCAGGCGCTC
ACCCCGGACA AGCCGTTCTT CATGTATTTC GCGCCCGGTG CCACCCACGC GCCACACCAC
GTGCCCCGGG AGTGGTCCGA CCGGTACCGC GGCGAGTTCG ACGCCGGCTG GGACGTGTTG
CGCGAGCAGA TCTTCGCCCG CCAGAAGGAA CTCGGCGTGA TCCCGCAGGA CGCCGAGCTG
ACCCGGCGCC ACGACGAGAT CCCCGGCTGG GACGACATGC CCGACCGGCT CAAGCCGGTG
CTCGCCCGGC AGATGGAGAT CTATGCCGGC TTCATGGAGC AGACCGACCA CGAGGTCGGG
CGGCTGATCG ACGCGGTCGA CGGCCTCGGC GCACTCGACA ACACGCTGAT CTACTACATC
ATCGGCGACA ACGGCGCGTC GGCGGAGGGC ACGCCGAACG GGTGCTTCAA CGAGATGTGC
ACGCTCAACG GGCTGGCCGG GATCGAGACC GAGGATTTCC TGCTGTCCAA GATCGACGAC
TTCGGCACGC CGGACGCGTA CAACCACTAT GCGGTGGGCT GGGCGCACGC CCTGTGCGCG
CCGTATCAGT GGACCAAGCA GGTCGCCTCC CACTGGGGCG GCACCCGCAA CGGCACGATC
GTGCACTGGC CCGCGGGGAT CGACGCCGTC GGCCAGACCC GCGACCAGTT CCACCACGTG
ATCGACGTCG TGCCAACGAT TCTCGAGGCG GCCGACATCC CCGCACCACT GATGGTCAAC
GGCATCGCGC AGGCGCCCAT CGAGGGCTTC AGCATGATGT CGACGCTGCG GGCCGCCGAT
GCCGCCGAGA CCCACCGGGT GCAGTACTTC GAGATGTTCG GCAACCGCGG CATCTACCAC
GACGGTTGGA CGGCGGTCAC CAAACACCGG ACGCCGTGGC TGTCCGACCA GCCGGCGCTC
GAGGACGACG TCTGGGAGCT GTACGGGCCG GGCGACTGGA CCCAGGCGCA CGACCTGGCG
GCCGATGATC CGGCGAAACT CGCCGAACTA CAGCGTCTCT GGCTCATCGA GGCGGTCAAG
TACGACGTGT TGCCGATCGA CGACAGGTCG TACGAGCGCT TCAACCCGGA CATCTCCGGG
CGGCCGGTGC TCATCACCGG CAGCACCCAG ACGATCTTCC CCGGTATGCG GCTGATGGAG
AGCTGCGTGC TCAACATCAA GAACAAGTCG CATTCGGTGA CGGCCGAGCT GTCGGTGCCC
GAGTCCGGTG CGCAGGGGGT GGTGGTCAGC CAGGGCGGCG GTGTCGGTGG TTGGTGTCTG
TACGCGCACG AGGGCCGGTT GAAATACTGT TACAACTTCC TCGGCATCGA GTACTACTAC
GTCACCGCCG AGGCTCCGCT CTCGGCCGGC GATCACCTCC TGCGTATGGA ATTCGCCTAC
GACGGTGGGG GTTTGGGCAA GGGCGGCACC GTCACGCTCT TCTGTGACGG TGAAGCCGTC
GGGACGGGGC GGGTCGACCA GAGCGAGCCG ATGGCGTTCT CCGCCGACGA GATGTGCGAC
GTCGGCTCGG ACAGCGGCTC GCCGACGTCA CCCGACTACG GGCCGCACGA CAACGCTTTC
ACCGGCCGAA TCGACTGGGT GAAGATCGAT ATCGGCGCCG CCGACCACGA CCACCTGATC
ACCGCGGAGG ACAAGCTGAA CATCGCGATG TCGCGGCAGT GA
|
|---|
| Protein sequence | MSDSSPQNTG QQAAAAVRRD VLPIPDPRHV GLTTYDAKDP NTTYPPITRL RPPDGAPNVL
IVLIDDVGFG ASSAFGGPCR TPVAERLAAN GVKLNRFHTT ALCSPTRQAL LTGRNHHSVG
MGGVTEIATS APGYSSIRPK DKAPISETLR LNGYSTSQFG KCHEVPVWEV SPVGPFDQWP
TGSGFEHFYG FVGGEANQYY PGLYEGTTPV EPAKTPEQGY TLTEDLADRA ITWVRQQQAL
TPDKPFFMYF APGATHAPHH VPREWSDRYR GEFDAGWDVL REQIFARQKE LGVIPQDAEL
TRRHDEIPGW DDMPDRLKPV LARQMEIYAG FMEQTDHEVG RLIDAVDGLG ALDNTLIYYI
IGDNGASAEG TPNGCFNEMC TLNGLAGIET EDFLLSKIDD FGTPDAYNHY AVGWAHALCA
PYQWTKQVAS HWGGTRNGTI VHWPAGIDAV GQTRDQFHHV IDVVPTILEA ADIPAPLMVN
GIAQAPIEGF SMMSTLRAAD AAETHRVQYF EMFGNRGIYH DGWTAVTKHR TPWLSDQPAL
EDDVWELYGP GDWTQAHDLA ADDPAKLAEL QRLWLIEAVK YDVLPIDDRS YERFNPDISG
RPVLITGSTQ TIFPGMRLME SCVLNIKNKS HSVTAELSVP ESGAQGVVVS QGGGVGGWCL
YAHEGRLKYC YNFLGIEYYY VTAEAPLSAG DHLLRMEFAY DGGGLGKGGT VTLFCDGEAV
GTGRVDQSEP MAFSADEMCD VGSDSGSPTS PDYGPHDNAF TGRIDWVKID IGAADHDHLI
TAEDKLNIAM SRQ
|
|---|
| |