Gene Mjls_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3973 
Symbol 
ID4879682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4198541 
End bp4199188 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID640141285 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001072239 
Protein GI126436548 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.14327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0339732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT CCTACGGCCA ACACTGCGCG CTGGCCAAGA GTCTCGACCT GGTCGGTGAC 
CGGTGGACGC TGTTGATCGT GCGCGAGCTG CTCGACCGGC CACGGCGTTA CGGGGACCTG
CTGAACAGCC TCACGCCGAT CGCCACCGAC ATGCTCGCCG GGCGGCTGCG CGATCTCGAG
CGCAACGGGC TGGTGGTCAA ACGCGAACTC CCCAAACCGG GGTCGGGAAA CGTCTACGAC
CTCACCGACG ACGGACGCGC GCTCGAGGAC GTCATCAACG CGTTCGTGCG GTGGGGCAGG
CATCTTCTGT TCACGCGGAC CCCGACGGAT CTGGTGCGCC CCGAATGGCT GGCGCGCGCG
GTGCGCGCCT ATGTGCGTGA CGACCGGACC GGACCCGATC TGGTGCTGCG CCTGGCGACC
CCGCAGGGCG GGGCGACCAT CCTGATCGGC ACCCGGCGGG TGGAGTTGGT CGGCGATGAG
GTCGCCCCGG ATGTGGTGCT GACCGGTGAG GTGGACGTGC TGGCCGCCGC CACCGACCCC
GCCCGCGTCG ACGAACTGGT CGCCGCGGGC AGGTTGCACG TCGCCGGCGC CCCCGAAGCG
GTTCGACAAA TCGCCGAGGT GTTCACCCCG CCCCGGGTTC GCCTCTGA
 
Protein sequence
MSRSYGQHCA LAKSLDLVGD RWTLLIVREL LDRPRRYGDL LNSLTPIATD MLAGRLRDLE 
RNGLVVKREL PKPGSGNVYD LTDDGRALED VINAFVRWGR HLLFTRTPTD LVRPEWLARA
VRAYVRDDRT GPDLVLRLAT PQGGATILIG TRRVELVGDE VAPDVVLTGE VDVLAAATDP
ARVDELVAAG RLHVAGAPEA VRQIAEVFTP PRVRL