Gene Mjls_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3944 
Symbol 
ID4879653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4166485 
End bp4167408 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID640141256 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001072210 
Protein GI126436519 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.100329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCG ATTCGACGAG TACGACGGCG CGCTCGGGGC TGGACACCTC GCGGTTCGCC 
TCGCGCCGGA CGCTGGTGAC GCGACGGTTC CTGCGCAACA AACCGGCGGT GGGCGCGCTC
GCGCTGCTGG TGCTGATGTT CGCCGGCTGC TATCTGTTGC CGCCGCTGCT GCCCTACAGC
TACACCGATC TCGACTACTA CGCGCTGCAG CAGCCGCCGA CCACCGAGCA CTGGTTCGGC
ACCAACGCGC TCGGCCAGGA CCTGCTGGCC CAGACGCTGC GCGGTATGCA GAAATCGATG
CTCATCGGCG TCGCGGTGGC GTTCATCTCG ACGATCATCG CGGCCACCGT CGGCTCCATC
GCCGGCTACT TCGGCGGATG GCGCGACCGC ACGCTGATGT GGCTGGTTGA CCTGCTGCTG
GTGGTGCCCA GCTTCATCCT CATCGCGATC GTGACACCGC GGACCAAGGA GTCCGGCACC
ATCCTGTGGC TGATCCTGCT GCTGGCGGCG TTCAGTTGGA TGATCAGTTC ACGCATCGTG
CGGGGTCTGA CGATGAGCCT GCGCGACCGC GAATTCGTCG TCGCCGCCCG CTACATGGGG
GTGCCGCACT GGCGGATCAT CGTGCGCCAC ATCGTGCCCA ACGTCGCGTC GATCCTCATC
ATCGACACCG CGCTCAACGT CGGGTTGGCG GTGCTCGCCG AAACCGGGCT CAGCTTCCTG
GGTTTCGGGG TGCAGCGACC CGACGTCTCA CTCGGCACGC TGATCGCCGA CGGCACCGGT
TCGGTCACCA CCTTCCCATG GGTGTTTCTG TTCCCCGCCG GGGTGCTGGT GCTGATCATC
CTGTGCGCCA ACCTCATCGG CGACGGCCTG CGCGACGCAC TCGACCCGGG GATCCGCCCG
GCCCGGAAAG GGCGGAAGAC ATGA
 
Protein sequence
MMSDSTSTTA RSGLDTSRFA SRRTLVTRRF LRNKPAVGAL ALLVLMFAGC YLLPPLLPYS 
YTDLDYYALQ QPPTTEHWFG TNALGQDLLA QTLRGMQKSM LIGVAVAFIS TIIAATVGSI
AGYFGGWRDR TLMWLVDLLL VVPSFILIAI VTPRTKESGT ILWLILLLAA FSWMISSRIV
RGLTMSLRDR EFVVAARYMG VPHWRIIVRH IVPNVASILI IDTALNVGLA VLAETGLSFL
GFGVQRPDVS LGTLIADGTG SVTTFPWVFL FPAGVLVLII LCANLIGDGL RDALDPGIRP
ARKGRKT