Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3939 |
Symbol | |
ID | 4879648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4160895 |
End bp | 4162760 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640141251 |
Product | glycosyl transferase family protein |
Protein accession | YP_001072205 |
Protein GI | 126436514 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.186492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCGAG TGACCCTGAC CCTTGACGCC GAGCAGACGC AGAATCGCCC GAATGATCGC CCGAGAGCGC GATTCTCTGT CTGGTCGCCG AGGATCGGGC TCGGCGTGCT GCTGGCCGGG ACCGCCGTGC TGTACCTGTG GAACCTGTCG GCCAGCGGAT GGGCCAACGC GTTCTATTCG GCCGCCGCGC AGGCCGGGTC CCAGAACTGG ACGGCCATGC TGTTCGGGTC CAGTGATGCG GCCAACGCCA TCACCGTCGA CAAGACGCCC GCGGCGCTGT GGGTGATGGA CCTGTCGGTA CGGGTGTTCG GGCTGAACTC GTGGAGCATC CTGGCGCCGC AGGCCCTGAT GGGAGTGGCC GCCGTCGCGG TGCTGTACGC GGCGGTGCGG CGTGTCAGCG GACCGGGCGC CGCGCTGCTG GCCGGCGCGG TGCTCGCGGT GACCCCCGTG GCCGCGTTGA TGTTCCGGTT CAACAACCCC GACGCGCTGC TGGTCCTGCT GCTCGTCGTG GCCGGCTACT GCGTGACCCG GGCCTGCGAA CCCGATGCGC GCCGATGGTG GCTGATCGCC GCCGGGGTGG CCGTCGGATT CGGCTTCCTG GCCAAGATGC TGCAGGCATT CCTCGTGCTC CCGGGTTTCG TGGCGGCCTA TCTGCTCGCC GGCAGCCGTC CGGTGGGCCG CCGGATCCTC GACCTGGCAG GCGCGGCCGC GGCGATGGTG GCGGCCGCCG GCTGGTATCT GCTGCTCGCC GAGCTGTGGC CGGCCGACTC CCGGCCATAC ATCGGCGGAT CGCAGCACAA CAGCATCGTC GAACTGGCCT TGGGTTACAA CGGTTTCGGC CGACTCACCG GTGACGAACC GGGTGGGTTG GGCAACCTCA ACCACGACGT CGGGGCGGGG CGGCTGTTCG GTTTCGGGAT GGGTCTCGAC ATCGCGTGGC TGCTGCCCGC GGCGCTGATC TGCCTCGGCG CCGCGCTGCT GCTCACCCGC CGGACACCCC GCACCGACAC CACCCGCGCG GCCCTGCTCA GCTGGGGCGG GTGGCTGGTC GTGACGGCCG TGGTGTTCAG CTTCGCCAAC GGCATCGTGC ACTCGTACTA CACGGTCGCG CTGGCACCGG CGATCGCCGC GGTCATCGGC ATCGGCTCAC ACCTGCTGTG GCGCAACAGG TCCCGACCGT GGTGTGCCGT GTCCATGGCC GGTGCAGTGC TCGTCACCGC GGTGCTGGCC GCGGTGCTGC TGTCGCGCAA CGCCGACTGG ATGCCGTGGC TGCGGGCGGC CGTCGCGGTC GGGGGAGTGG GTGCTGCGGT GCTGCTGATC GTGGCGGGCC GGCTGCCCGA CGGTGTCGTC CGCGCCGCCG CCGGACTGGC CGTCGTGGTG TGTCTCGCAT CGCCCGCGGC CTATTCGGTC GCCACCGCGG CGGCCCCGCA CACCGGCGCC ATCCCGTCGG TGGGGCCGGC GCGCGGGGGT TTCGGCGGAC CGCCCGGACT GCTGAGCTCA CCCGAGCCCG GTGAACAGCT CACCGCGCTG CTGGCCCGCG TCGCCCACGC GTACCGGTGG ACCGCCGCGG TGGTCGGGTC GAACAACGCG GCCGGCTACC AATTGGCAAG CGGCGCACCG GTGATGGCGC TGGGCGGGTT CAACGGCACC GATCCGGCGC CCACCCTCGA ACAGTTCCAA CGTCACGTCG CCGACGGCGA TGTGCACTAC TTCATCGGAA GCCGCTCACC CCTCGGCTTC GGCCGCGGCG CCGAGCAGAG CGGCAGCCGG GCCGCCGCGG ACATCGCGGA CTGGGTGCAG GCGCGTTACC CGGGGCGAAC CGTCGACGGT GTCGTCGTCT ACGACCTCAC CCGGGCCCCG GCGTGA
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Protein sequence | MGRVTLTLDA EQTQNRPNDR PRARFSVWSP RIGLGVLLAG TAVLYLWNLS ASGWANAFYS AAAQAGSQNW TAMLFGSSDA ANAITVDKTP AALWVMDLSV RVFGLNSWSI LAPQALMGVA AVAVLYAAVR RVSGPGAALL AGAVLAVTPV AALMFRFNNP DALLVLLLVV AGYCVTRACE PDARRWWLIA AGVAVGFGFL AKMLQAFLVL PGFVAAYLLA GSRPVGRRIL DLAGAAAAMV AAAGWYLLLA ELWPADSRPY IGGSQHNSIV ELALGYNGFG RLTGDEPGGL GNLNHDVGAG RLFGFGMGLD IAWLLPAALI CLGAALLLTR RTPRTDTTRA ALLSWGGWLV VTAVVFSFAN GIVHSYYTVA LAPAIAAVIG IGSHLLWRNR SRPWCAVSMA GAVLVTAVLA AVLLSRNADW MPWLRAAVAV GGVGAAVLLI VAGRLPDGVV RAAAGLAVVV CLASPAAYSV ATAAAPHTGA IPSVGPARGG FGGPPGLLSS PEPGEQLTAL LARVAHAYRW TAAVVGSNNA AGYQLASGAP VMALGGFNGT DPAPTLEQFQ RHVADGDVHY FIGSRSPLGF GRGAEQSGSR AAADIADWVQ ARYPGRTVDG VVVYDLTRAP A
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