| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3915 |
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| Symbol | |
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| ID | 4879624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 4135973 |
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| End bp | 4137958 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640141227 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001072181 |
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| Protein GI | 126436490 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.688937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCTG ATCAGGGGGC GCTGGGAGAT CACCGGGTTC GCTCACGAAA ACCGGCCGTG
GTGTTCGTCG TCGGGTGTCT GTTCGCCGTC CTCGTCGTCG GGTGGCTGTC GCTGGTGACC
CAGCCGACGG CGCTGGCCAG CACGGCGTGG TGGCCCGTCG CCGGGATCGC GGTCGGGTTG
GGCATCCGCT TCCCGCGCCG TCACGTGTGG GCGCCGGCCG CCGCCGTCGC CGCGATCACC
CTTCCGCTCC TGCTCTGGGC GGGACGGCCC GCCGCGCTCG CGACCGCGCT CGCATTCGCC
GTCGCCCTCG AGATGGTGAT CGCCACCCTC ATCCTCAGGG GGCGCCACGA TCGCCTGCCG
AGCCTGTCGG AGCCGCGCGA CCTCGGCCGG TTACTGGTGG CCGTCGGCTC GGCGGCGATC
GTCTACGACG TGGTCGGCGC CGGCGCCACC TACCTGCTCG CCGATTCCAC CGAGGCGTGG
ATCCGGTTCG TCACGTCGGC GCCGAAGCAC GCGGCCGGGA TGCTGCTGCT GGTCCCGCTG
TTCATGCACC TGCCGCGCCG CCCCCGGCCT GCGGGTCCGG TCGAGACCGT CGCGCAGGTC
GTGACGACCC TGGGCCTGGT CACCTTCGTG TTCGCGTTCA ACCCCGGAAT GCCGCTGTCC
TTCCTCCCCT TCATGCCACT GGTGTGGGTG GCGATCCGAC TGACGACCCG GGAACTGATC
CTGCTGATGC TGGCGATCGC CGTCATCGCC TCGGCCGGCA GCGCGTACGG CACCGGGCCG
TTCGCGTTCA ACCTCCTCGC ACCGGAGGTG GGCAACCTCG TCCTGCAGGT CTTCGAGCTG
TCGATGGTGG TCGTCTTCCT CTCGCTCTCG CTCGCGGTCG GCCACGAGCG GACCACCGCA
CGGCGCCTCA ACGAGAGCGA GGAGTTGTTC CGCCGGATCT TCGAAACGTC GGTGGCCGGG
ATGCTGATCG CCACCCGTGC CGCCACGGGA TGGAAGGTGT TGCGCGCCAA CGACTCCGCG
GTGGCCATCA TCCCCGGTCT CGCCGACGCG TCGGCCGAGC TCACCGATCT GTTGGGCGAG
GAGGCCACCG CCGCGCTCTC GGCGGAAGCC GACGCGCTCA CCGAGGGCAA CGCGCGCCTG
ACGCTGACCA CCGGCACCGA GCGGATCCTC AACGTCAGCA TCTCCCCGAT CAGCGTCGAC
GGGGACAGCA GGACCCTCGC GCTGCAGTTC TACGACATCA CCGAGGCGAT GCGCGCCCGC
AGGCTGGAAC AGGAGGAACT CGAGCGCGCC GCCGAAGTGC AGCGTGCCCT CCTGCCCGGG
ACGCTCCCAC CCACCCCCGG GTGGACTTCC GGTGCGGCTT CGGTGCCGGC CAGACAGGTC
GGCGGGGACT TCTACGACAT CCGGGTCCAG GTCCCGCACG TGGTCCTCAG CCTCGGCGAC
GTCATGGGTA AGGGCATGGG CGCGGGAATG TTGGCCGCCG CGACCAGAGC CGCGCTGCGC
GCCACCGACC CCGAGCTCAG TCCATCGGCC GCCGTGAGCC ACATGGCCGG GGTCGTCGAT
CACGACCTGC AACGCACCAG CGCCTTCATC ACGCTGACCT ACGTCCTCGT CGACCTCGTC
ACCGGCGACT TCCGCGTCGC CGACGCCGGG CACGGACTGC ACTTCGTCGT CCGGACCGGA
TCGGGTCTGG TGGAGCGCAC CGCCTCCAGC GATATGCCGG TGGGGCTCGA CAGCGGCTGG
GGCGAGAAGC GCGGGGCGCT CCAGCCCGGC GACGCGATCC TCCTCGTCAG CGACGGCGTG
ATGGACCTGT GGGGCGGCTC CGTCGAAGAG CTGTCGGATG CCGTGGCGCA TTGCGCCCGG
CAGCACGGCA CGAGCCCGCA GGCGTTGGTC GACGCCCTGT GCGCGCGGGC GAACGGTGAT
CTGGACCGCG ATGATGTGAC GGCCGTCGTC CTGCGGCGGG AACCGGTGGA CGTGGCGGCA
CGCTGA
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| Protein sequence | MDPDQGALGD HRVRSRKPAV VFVVGCLFAV LVVGWLSLVT QPTALASTAW WPVAGIAVGL
GIRFPRRHVW APAAAVAAIT LPLLLWAGRP AALATALAFA VALEMVIATL ILRGRHDRLP
SLSEPRDLGR LLVAVGSAAI VYDVVGAGAT YLLADSTEAW IRFVTSAPKH AAGMLLLVPL
FMHLPRRPRP AGPVETVAQV VTTLGLVTFV FAFNPGMPLS FLPFMPLVWV AIRLTTRELI
LLMLAIAVIA SAGSAYGTGP FAFNLLAPEV GNLVLQVFEL SMVVVFLSLS LAVGHERTTA
RRLNESEELF RRIFETSVAG MLIATRAATG WKVLRANDSA VAIIPGLADA SAELTDLLGE
EATAALSAEA DALTEGNARL TLTTGTERIL NVSISPISVD GDSRTLALQF YDITEAMRAR
RLEQEELERA AEVQRALLPG TLPPTPGWTS GAASVPARQV GGDFYDIRVQ VPHVVLSLGD
VMGKGMGAGM LAAATRAALR ATDPELSPSA AVSHMAGVVD HDLQRTSAFI TLTYVLVDLV
TGDFRVADAG HGLHFVVRTG SGLVERTASS DMPVGLDSGW GEKRGALQPG DAILLVSDGV
MDLWGGSVEE LSDAVAHCAR QHGTSPQALV DALCARANGD LDRDDVTAVV LRREPVDVAA
R
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