| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3908 |
|---|
| Symbol | |
|---|
| ID | 4879617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4128401 |
|---|
| End bp | 4129090 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640141220 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_001072174 |
|---|
| Protein GI | 126436483 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.582833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CCCGCACCCG CCGCCGTCGC GTCCAGACCG CGCCCGTCGG CACCGTCGTC
GCCTACATCC GCGTGTCCAC CGAGGAGCAA GCGGCCAGCG GTGCCGGGCT CGACGCGCAA
CGCGCCGCCA TCGCCGCCGA GTGCGACCGC CGGGGCTGGA CCATCGTCGG GTGGCACGCC
GACGAGGGCG TCAGCGGCGG CAAGGCCATC GACGCCCGGC CCGCCCTCAC CGCCGCCATC
GACGCCGTGG AGTCGGCACA GGCGGCGGTG TTGATGGTGG CCAAGTCCGA CCGCCTGGCC
CGCAGCCTGC CCACCCTCCT CGACGTGCTC GACCGCACCC AGCGCGCGGG CGGCGTGGTC
GTCGCCGTCG ATGGCACGGT GGACACCAGC ACGGCGGCGG GGCGGTTCAC CACGCAGATC
ATGGGCAGCG TGGCCGAACT GGAACGCGGC CTCATCAGCG ACAGGACCAA GGCGGCGTTG
GCCGTCCGCA AGGCGCAGGG GGTGCGGCTC GGACGCCCGA CCACCGTGCC GCCGTCGGTG
GTCGAGCGCA TCGCCCGCGA ACGCGCCGCA GGGGCGACGT GGGCAGCCAT CGCCGACAGC
CTGAACGCCG ACGGCACGCC GACCGGCCAG GGCGGATCGA AGTGGTTCCC GAACACGGTG
GCCCGAATCC ACAAGCGAGT GGCGGCGTGA
|
|---|
| Protein sequence | MTTPRTRRRR VQTAPVGTVV AYIRVSTEEQ AASGAGLDAQ RAAIAAECDR RGWTIVGWHA
DEGVSGGKAI DARPALTAAI DAVESAQAAV LMVAKSDRLA RSLPTLLDVL DRTQRAGGVV
VAVDGTVDTS TAAGRFTTQI MGSVAELERG LISDRTKAAL AVRKAQGVRL GRPTTVPPSV
VERIARERAA GATWAAIADS LNADGTPTGQ GGSKWFPNTV ARIHKRVAA
|
|---|
| |