| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3855 |
|---|
| Symbol | |
|---|
| ID | 4879565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4077149 |
|---|
| End bp | 4078966 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640141164 |
|---|
| Product | putative fatty-acid--CoA ligase |
|---|
| Protein accession | YP_001072122 |
|---|
| Protein GI | 126436431 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.724696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00746256 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG GTACCGGGCA GATGGTTCAC GAAGGTCTGC TGAAGATCGA GGACTGCCTC
GACGCCGCGG GCAACATCGT GCTCCCGCCG GGCGTCACGT TGATCTCGCT CATCGACCGC
AACATCGCCG CTGTCGGCGA CGCCGTGGCG TACCGCTACC TCGACCACAC CGGCACCGAC
GAGGTGCGGG TCGCGGAGCT CACCTGGACC GAACTCGGCG TGCGGCTACG CGCGGTCGGT
GCGCGGATAC AGCAGCTCAC CTCCCGCGGC GACCGCGTCG CGATCCTCGC GCCCCAGGGC
CTGGACTGGG TCACCGGGTT CTTCGCCGCG ATCAAGGCGG GCACCATCGC GGTGCCACTG
TTCGCGCCCG AACTGCAGGG CCACGCCGAA CGCCTCCGGA CCGCGCTCGA GGACGCCCGC
CCAACCGTCG TGCTGACCAC CTCGGCGGCG GCCGGCGCCG TCGAAGGTTT CCTCGCCGAC
CTCGTGGGCG TCACGCGTCC GCACGTCGTG CTGATCGACG ACATTCCCGA CTCCGCGGGG
GAGTCGTTCG TGACCACGCC GATCGACGTC GACGACGTCT CGCACCTGCA GTACACCTCC
GGCGCGACCC GGCCCCCGGC CGGCGTCGAG ATCACCCACC GTGCCGTCGG CACGAACCTC
CTGCAGATGA TCCTGTCGAT CGACCTGCTG GACCGAAACA CCCACGGCGT CAGTTGGTTA
CCGCTGTTCC ACGACATGGG GCTGTCGATG ATCGGCTTCC CGGCCGTCTA CGGCGGGCAC
TCCACGCTGA TGTCGCCGAC GGCGTTCCTG CGCCGGCCCC AGCGCTGGAT CCGCGCGCTG
TCGGAGGGGT CCCGGCAGGG CCGCGTCGTC ACCGCCGCGC CGAACTTCGC CTTCGAGTGG
ACCGCCCAGC GGGGCTTGCC CGACGAAGGT GAGGACATCG ATCTGGCCAA CGTCGTCCTC
ATCATCGGAT CCGAACCGGT GAGCATGGCG GCCATCGACA CCTTCACCGC GGCCTTCGCC
GAATACGGGC TGCCGCCGAC GGCGGTCAAA CCGTCCTACG GCATCGCCGA GGCGACGCTG
TTCGTCGCGA CGATCGCCCC GGACGCGGAA CCGTCGGTGG CGCACTTCGA CCGCGCACAA
CTGGCCGCAG GCCGGGCGGT CCGCGTGGCC GCCGACGCGC AGGACGCGGT GGCCCAGGTG
TCGTGCGGTC AGATCGCCCG GAGCCAGTGG GCGGTGATCG TCGACCCCGA CTCCGGTGAA
GAAATGCCCG ACGGATATGT CGGCGAGATC TGGTTGCACG GTGAGAACCT CGGCCGCGGA
TACTGGGGTC GACCCGACGA GACTCGCGAG ACATTCTGCG CCGCACTGAC ATCGAGGGCG
GGAGGTCATG CCGACGGCGT TCCCGACGAC GGTCGCTGGC TGCGCACGGG CGACTTGGGC
ACCTATCTCG ACGGCGAGCT CTATGTCACC GGCCGGCTGG CGGACCTCAT CGTGATCGAC
GGGCGCGGGC ACTATCCGCA GGACATCGAG GCCACCACAG CGGACGCCTC CCCGCTGGTG
CGCCGCGGCC ACGCCACCGC GTTCACCGTC TCCGGCGAGC AGTTGGTGAT CATCGCCGAG
CGCGCATCGG GGACCCGCCG CGCCGACCCG GCGCCTGCCG TCGAGGCGAT CCGCGCCGCG
GTGCGGCAGC GCCACGGAGT CGAGGTCGCC GACGTGCGTT TCGTCCCCGC CGGCGCCATC
CCGCGGACCA CCAGCGGCAA GCTGGCCCGA CGGGCCTGTC GCGCCGAATA CGTCGACGGA
ACGCTGCGCG CGAACTAG
|
|---|
| Protein sequence | MSGGTGQMVH EGLLKIEDCL DAAGNIVLPP GVTLISLIDR NIAAVGDAVA YRYLDHTGTD
EVRVAELTWT ELGVRLRAVG ARIQQLTSRG DRVAILAPQG LDWVTGFFAA IKAGTIAVPL
FAPELQGHAE RLRTALEDAR PTVVLTTSAA AGAVEGFLAD LVGVTRPHVV LIDDIPDSAG
ESFVTTPIDV DDVSHLQYTS GATRPPAGVE ITHRAVGTNL LQMILSIDLL DRNTHGVSWL
PLFHDMGLSM IGFPAVYGGH STLMSPTAFL RRPQRWIRAL SEGSRQGRVV TAAPNFAFEW
TAQRGLPDEG EDIDLANVVL IIGSEPVSMA AIDTFTAAFA EYGLPPTAVK PSYGIAEATL
FVATIAPDAE PSVAHFDRAQ LAAGRAVRVA ADAQDAVAQV SCGQIARSQW AVIVDPDSGE
EMPDGYVGEI WLHGENLGRG YWGRPDETRE TFCAALTSRA GGHADGVPDD GRWLRTGDLG
TYLDGELYVT GRLADLIVID GRGHYPQDIE ATTADASPLV RRGHATAFTV SGEQLVIIAE
RASGTRRADP APAVEAIRAA VRQRHGVEVA DVRFVPAGAI PRTTSGKLAR RACRAEYVDG
TLRAN
|
|---|
| |