| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3850 |
|---|
| Symbol | |
|---|
| ID | 4879560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4072744 |
|---|
| End bp | 4073925 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640141159 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001072117 |
|---|
| Protein GI | 126436426 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.403742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00793734 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGT CGGTGATCGT TGCTGGGGCC CGCACGCCGG TAGGCAAGTT GATGGGTTCG
CTGAAGGACT TCTCGGGCAG TGATCTGGGC GGGATCGCGA TCAAGGCCGC GTTGGAGAAG
GCGGGTGTGG CACCGTCGTC CGTCGATTAC GTGATCATGG GCCAGGTGCT CACCGCCGGC
GCCGGGCAGA TGCCCGCCCG CCAGGCCGCC GTGGCCGCCG GTATCCCGTG GGACGTGCCT
GCGCTGACCA TCAACAAGAT GTGCCTATCG GGCATCGACG CGATCGCGCT GGCCGACCAG
CTCATCCGCG CGGGTGAGTT CGACGTCGTG GTCGCCGGTG GTCAGGAGTC GATGACCCAG
GCCCCGCACC TGCTCGTCAA CAGCCGCTCG GGATACAAGT ACGGCGACGT GACCGCGCTC
GACCACATGG CCTATGACGG CCTGCACGAC GTGTTCACCG ACCAGCCGAT GGGTGCGCTC
ACCGAACAGC GCAACGACGT CGACCAGTTC ACCCGCGCCC AGCAGGACGA GTTCGCTGCC
ACCTCGCATC AGAAGGCCGC CGCGGCGTGG AAGGACGGCG TATACGCCGA CGAGGTGGTG
CCGGTGTCGA TCCCGCAGCG CAAGGGTGAC CCCATCGAGT TCTCGGAGGA CGAGGGCATC
CGGGCCAACA CCACGGCCGA GTCGCTGGCC GGGCTCAAGC CGGCGTTCCG CAAGGACGGC
ACCATCACCG CCGGTTCGGC GTCGCAGATC TCGGACGGCG CTTGCGCAGT GGTGGTGATG
AACAAGGCCA AGGCCGAGGA ACTGGGCCTG ACCTGGCTCG CGGAGATCGG CGCGCACGGC
GTGGTCGCCG GCCCCGACTC CACCCTGCAG AGCCAGCCGG CCAACGCGAT CAAGAAGGCG
ATCGCCCGCG AGGGCATCTC GACCGATCAG CTCGACGTGA TCGAGATCAA CGAGGCGTTC
TCGGCGGTCG CGTTGGCGTC CACCCAGGAA CTCGGCGTGG ATCCGGAGCG GGTCAACGTC
AACGGCGGTG CCATCGCGAT CGGCCACCCG ATCGGGATGT CCGGTGCCCG GATCACGCTG
CACGCGGCCC TCGAGCTGGC CCGCCGCGGC TCCGGTTACG CGGTGGCCGC GCTCTGCGGT
GCGGGCGGTC AGGGCGATGC GCTGATCCTG CGTCGCCCCT GA
|
|---|
| Protein sequence | MTTSVIVAGA RTPVGKLMGS LKDFSGSDLG GIAIKAALEK AGVAPSSVDY VIMGQVLTAG
AGQMPARQAA VAAGIPWDVP ALTINKMCLS GIDAIALADQ LIRAGEFDVV VAGGQESMTQ
APHLLVNSRS GYKYGDVTAL DHMAYDGLHD VFTDQPMGAL TEQRNDVDQF TRAQQDEFAA
TSHQKAAAAW KDGVYADEVV PVSIPQRKGD PIEFSEDEGI RANTTAESLA GLKPAFRKDG
TITAGSASQI SDGACAVVVM NKAKAEELGL TWLAEIGAHG VVAGPDSTLQ SQPANAIKKA
IAREGISTDQ LDVIEINEAF SAVALASTQE LGVDPERVNV NGGAIAIGHP IGMSGARITL
HAALELARRG SGYAVAALCG AGGQGDALIL RRP
|
|---|
| |