Gene Mjls_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3848 
Symbol 
ID4879558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4071394 
End bp4072293 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID640141157 
Productthioredoxin domain-containing protein 
Protein accessionYP_001072115 
Protein GI126436424 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00807359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACACGTC CACGACCTTC CATCGGGCCG GCACTGGCCG GTGCGGTTGA TCTGTCCGCG 
CTCAAACAAC GCCCCGCCGC CGAGGCGGCC GGGCCCGCCG GGGCAGGCGG CCCGGGCGGA
GTCGAGATCA CCGAGGCGAA CCTCGAAGCC GAGGTGTTGA TCCGCTCCAG TCAGGTTCCC
GTGGTGGTGC TGCTGTGGTC ACCCCGCAGC GACTCCAGCG TGGCACTGGG GCAGACGCTC
GCCGAGCTGG CGAACGCCGA CGCCGGCAAG TGGTCGCTGG CGACGGTCAA CGTCGACACC
ACGCCGCGGG TGGCGCAGAT GTTCGGCGTG CAGGCGGTGC CGACGGTCGT CGCGCTCGCC
GGAGGCCAGC CGATCTCGAG CTTCCAGGGG CCGCAGCCCG CCGATCAGCT ACGGCGCTGG
ATCGACTCGC TCCTCGAAGC GACGGCAGGC AAGCTCGCCG GATCCGGTGA TCCCGACCAG
CCCGAGCAGG TCGACCCCGA GGTCGCGCAG GCACGCGCCT TCCTCGACAA CGGCGACTTC
GACGCCGCGC TGAGCGCCTA CCAGGCGATC CTCGACGCCC AGCCGAATCA CGCCGAGGCC
AAGGGCGCGG TCCGGCAGAT CGTGTTCCTC CAACGTGCGA CGACGCAGCG CCCGGACGCG
GTGACCGTCG CCGACGCCGC ACCCGACGAC GTCGACGCCG CGTTCGCCGC GGCCGACGTC
GAGATCCTCC AGCAGCAGGT CGAGGCGGCG TTCGAGCGGT TGATCGCCTT GGTCAAGCGC
ACCGCGGGCG ACGACCGCAC CCGGGTGCGA ACCCGGCTCA TCGAACTGTT CGAGCTCTTC
GACCCGGCCG ATCCCGAGGT CATCGCGGGC CGGCGCAAGC TCGCCAACGC CCTGTACTGA
 
Protein sequence
MTRPRPSIGP ALAGAVDLSA LKQRPAAEAA GPAGAGGPGG VEITEANLEA EVLIRSSQVP 
VVVLLWSPRS DSSVALGQTL AELANADAGK WSLATVNVDT TPRVAQMFGV QAVPTVVALA
GGQPISSFQG PQPADQLRRW IDSLLEATAG KLAGSGDPDQ PEQVDPEVAQ ARAFLDNGDF
DAALSAYQAI LDAQPNHAEA KGAVRQIVFL QRATTQRPDA VTVADAAPDD VDAAFAAADV
EILQQQVEAA FERLIALVKR TAGDDRTRVR TRLIELFELF DPADPEVIAG RRKLANALY