| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3846 |
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| Symbol | |
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| ID | 4879556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 4067012 |
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| End bp | 4069099 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640141155 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001072113 |
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| Protein GI | 126436422 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0237577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGCC GTATCGGAAT CGATGACGTC GCGCCCGTGG TATCCGGCGG CAGGTATCCG
GCCAAAGCGG TGGTGGGTGA GGTGGTGCCG GTGAGCGCCA CGGTGTGGCG CGAGGGCCAC
GAAGCCGTCT CCGCAACGCT GGTGGTGCGC TATCACGGCA CGTCCTATCC CGAACTCGCC
GACGCTCCGG TCGGCCGGGT GAGCACCACC GAGGCCGTGC CGATCGACGA GGTCGTCAAC
CCTTCGCCGC GGAAGAAGCC GCAGGCGCTG CCGATGAGCC TGGGCCGCAC CCCCGATGTC
TTCCACGGGC ACTTCGTACC GGACGCGGTC GGGTTGTGGA CCTACCGTGT CGACGGCTGG
GGCGATCCGA TCGCCAGCTG GCGCCACAAC GTGATCGCCA AACTCGACGC CGGCCAGAGC
GAGTCCGAAC TGGACAACGA TCTGCTCGTG GGCGCGCGGC TGCTGGAGCG GGCCGCCACC
GGTGTCCCCC GTCAGGACCG CTACCCGCTG GTGCAGGCCG TCGAACGACT GCGCGAACCC
GGCGATCCGT TCTACCGGGC GGGGGCGGCG CTGGCGGCCG ACGTCACCGC ACTGCTCGAC
CAGTATCCGC TGCGCGAATT GGTCACCCGC GGTGAGCAAT ACGGCGTCTG GGTGGACCGC
CCGCTGGCCC GCTTCGGCTC CTGGTACGAG TTCTTCCCCC GCTCCACCGG CGGTTGGGAC
AGCCAGGGCC ACCCCGTGCA CGGCACGTTC GCCACCGCCA CCAAGGCGCT GCCCCGGGTC
GCCCGGATGG GCTTCGACGT GGTCTACCTC CCGCCGATCC ACCCGATCGG CAAGGTGCAC
CGCAAGGGCC CGAACAACAG CGTGACCGCG GGCCCGAACG ACGTGGGGTC ACCGTGGGCG
ATCGGCAGCG ACGAGGGCGG CCACGACGCC GTGCACCCGG AGTTGGGCAC CATCGAGGAC
TTCGACGACT TCGTCGCCGC GGCCCGTGAC GAAGGCCTCG AGGTGGCGCT GGACCTGGCG
CTGCAGTGTG CGCCGGACCA TCCGTGGGCG CGCGAGCATC CGGAGTGGTT CACCGTGCTG
CCCGACGGCA CCATCGCCTA CGCGGAGAAC CCGCCGAAGA AGTACCAGGA CATCTATCCG
CTGAACTTCG ACAACGACCC GACGGGGTTG TACATGGAGG TGCTGCGGGT GGTCCGGTTC
TGGATCTCCC ACGGCGTCAA GGTCTTTCGC GTGGACAACC CACACACCAA ACCGCCCAAC
TTCTGGGCGT GGCTGATCGG GGAGATCAAG AACGAGGACC CCGACGTGCT GTTCCTGGCC
GAGGCGTTCA CCCGGCCGGC CCGCCTGTAC GGGCTGGCGA AACTCGGCTA CACGCAGTCG
TACACGTACT TCACCTGGCG GACGTCGAAA CACGAGTTGA CCGAGTTCGG CAGGCAGATC
GCCGAACACG CCGACTATGC GCGGCCCAAC CTGTTCGTCA ACACCCCCGA CATCCTGCAC
GAAAGCCTCC AGCACGGCGG CCCCGGCATG TTCGCGATCC GCGCGGTGCT GGCGTCCACG
ATGAGTTCGG TGTGGGGGGT CTACTCCGGT TACGAACTGT TCGAACACCG ACCGGTGCGG
GAAGGCAGCG AGGAGTACCT CAACTCCGAG AAGTACGAAC TGCGTCCGCG CGACTTCGAC
GCCGCCCTGG CCGACGGGGA GTCACTGGAG CCGTTCATCA CCCGGCTCAA CGAGATTCGG
CGGGTGCATC CGGCGCTGCA CGAACTGCGG ACCATCACGT TCCACTACCC CGACAACGAC
GCCGTCCTGG CCTACAGCAA GTTCGACCCG GCCACCGGTG ATCAGGTCCT CGTCGTGGTC
ACGCTCAACC CGTTCGGGCC CGAAGAGGCC ACAGTGTGGT TGGACATGCC CGCATTGGGA
ATGGAGCCAT ACGACAGGTT CTGGGTCCGC GACGAGATCA CCGGAGAGGA ATACCAGTGG
GGGCAGTCGA ACTACGTGCG CATCGAACCG GCGAAGGCGG TCGCGCACGT GCTCAACATG
CCCCAGGTGC CCGCCGACCA ACGCCTCAAC CTACTGCGTA GGGAGTGA
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| Protein sequence | MAGRIGIDDV APVVSGGRYP AKAVVGEVVP VSATVWREGH EAVSATLVVR YHGTSYPELA
DAPVGRVSTT EAVPIDEVVN PSPRKKPQAL PMSLGRTPDV FHGHFVPDAV GLWTYRVDGW
GDPIASWRHN VIAKLDAGQS ESELDNDLLV GARLLERAAT GVPRQDRYPL VQAVERLREP
GDPFYRAGAA LAADVTALLD QYPLRELVTR GEQYGVWVDR PLARFGSWYE FFPRSTGGWD
SQGHPVHGTF ATATKALPRV ARMGFDVVYL PPIHPIGKVH RKGPNNSVTA GPNDVGSPWA
IGSDEGGHDA VHPELGTIED FDDFVAAARD EGLEVALDLA LQCAPDHPWA REHPEWFTVL
PDGTIAYAEN PPKKYQDIYP LNFDNDPTGL YMEVLRVVRF WISHGVKVFR VDNPHTKPPN
FWAWLIGEIK NEDPDVLFLA EAFTRPARLY GLAKLGYTQS YTYFTWRTSK HELTEFGRQI
AEHADYARPN LFVNTPDILH ESLQHGGPGM FAIRAVLAST MSSVWGVYSG YELFEHRPVR
EGSEEYLNSE KYELRPRDFD AALADGESLE PFITRLNEIR RVHPALHELR TITFHYPDND
AVLAYSKFDP ATGDQVLVVV TLNPFGPEEA TVWLDMPALG MEPYDRFWVR DEITGEEYQW
GQSNYVRIEP AKAVAHVLNM PQVPADQRLN LLRRE
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