Gene Mjls_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3778 
Symbol 
ID4879488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4000581 
End bp4001753 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID640141086 
Productamidohydrolase 2 
Protein accessionYP_001072045 
Protein GI126436354 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC CCAGCCCCAC TCAGACCCTT TATCCCCCCG AAGGTTTCGG CGCCCCCAAG 
CACCGGCACG GCCACTCCGC CGGCGCGGTG ACCGGCTTAC CCGAAGGCAC CGAGATCTTC
AGCGCCGACA ACCACATCTC GGTCGCCGAC GACATCTTCT ACGAACGCTT CCCCGAGGAG
CTCAAGGGCG CCGCCCCGCG CATCTGGTAC GAGGACGGCG CCTACATGGT CGGCATGAAG
GGCAAGGCCT GGACCGGTGG CGATTTCGGC CGCGTGCTCA TGCAGTACGA CGACCTCGCC
GGGGCCGCCT CGAACAACAT CGAGGCGCGC ATCCGCGAGC TCAAAGAGGA CGGTATCGAC
AAGGAGCTCG CGTTTCCGAA CGCTGTCCTG GCCCTGTTTC ACTACCCGGA CAAGGCGCTG
CGCGAGCGGG TGTTCCGGAT CTACAACGAG CACATCGCCG ATCTGCAGGA GCGCAGCAAT
GGGCACTTCT ACGGTGTCGG CCTGATCAAC TGGTGGGACC CGAAGGGGAC CCGCAGCACA
CTGGAAGAGC TGAAGTCGCT GGGGCTCAAG ACGTTCCTGC TGCCGCTGAA CCCCGGCAAG
GACGACGAGG GCAACATCTA CGACTACGGC AGCACCGCGA TGGACGCGGT GTGGGACGAG
ATCGAGGCCT CGGGTATCCC GGTCAGCCAC CACATCGGTG AGACGCCGCC CAAGACGCCG
TGCCAGAACA ACAGCGTCGT GGTCGGCATG ATGGTCAACG TCGACTCGTT CCGCGAACAG
TTCGCCAAGT ACGTCTTCTC CGGCATCCTC GACCGGCATC CGTCGCTGAA GATCGGCTGG
TTCGAGGGCG GGATCGCCTG GGTCCCCACC GCGCTGCAGG ACGCCGAGCA CATGCTGGCC
TCCTACCGGC ACATGTTCAA CCACCAGCTC GAACACGACG TGCGTCACTA CTGGGACAAC
CACATGAGCG CGTCGTTCAT GGTCGATCCC CTTGGCCTGC AGCTGATCGA CCGCATCGGC
GTCGACAACG TGATGTGGTC GAGCGACTAC CCGCACAACG AATCGACGTT CGGGTATTCG
GAGAAGTCGC TGGCCACCGT CGTCGACGCG GTCGGCCCGG AGAACGCCGT CAAGATCGTC
AGCACCAATG TGCGGAAGTT CCTGGGGGTC TGA
 
Protein sequence
MSAPSPTQTL YPPEGFGAPK HRHGHSAGAV TGLPEGTEIF SADNHISVAD DIFYERFPEE 
LKGAAPRIWY EDGAYMVGMK GKAWTGGDFG RVLMQYDDLA GAASNNIEAR IRELKEDGID
KELAFPNAVL ALFHYPDKAL RERVFRIYNE HIADLQERSN GHFYGVGLIN WWDPKGTRST
LEELKSLGLK TFLLPLNPGK DDEGNIYDYG STAMDAVWDE IEASGIPVSH HIGETPPKTP
CQNNSVVVGM MVNVDSFREQ FAKYVFSGIL DRHPSLKIGW FEGGIAWVPT ALQDAEHMLA
SYRHMFNHQL EHDVRHYWDN HMSASFMVDP LGLQLIDRIG VDNVMWSSDY PHNESTFGYS
EKSLATVVDA VGPENAVKIV STNVRKFLGV