Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3682 |
Symbol | |
ID | 4879393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 3908041 |
End bp | 3909144 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640140991 |
Product | virulence factor Mce family protein |
Protein accession | YP_001071950 |
Protein GI | 126436259 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.192954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAT ACCGCGGGTC CCAACTCATC AAGGCAGGCA TCATCGGTGT CGTCCTGATG ATCCTCGTCA TCATGATCGG GCTGCAGCCG ATACGACTGC TGTCCTGGGC CACAGCCCTG CGTTACCAGG CGCTGTTCAC CGAGGCCGGT GGCATCGCCG GCGGCAACGA CGTGACGGTG TCCGGCCTCA AGGTCGGCCA GGTGTCGTCG GTCGAACTCG TCAACGGCGA TGCGCTGGTT TCATTCACGG TCGACGGCAA GTACGCGCTG GGTTCCGACA CCACCGCGCA CATCCGCACC GGAACCCTTC TCGGAGAGCG GGTGCTGGCG CTGGAGTCCG AGGGAAGCGG CACGCTGGAC CGCGACCAGC CCATCCCCAC GTCGCGTACG TCGTCGCCGT TTTCGTTGAC CGATGCGGTC AGTGAGCTGA CGGCCAATAC CGCAGAGACC GACACAGATT CGCTCAACCG ATCGTTGGAC ACTCTCTCGG AGACGCTCGA CCAGATCGCC CCACAGCTCG GTCCGACATT CGACGGGGTC TCCCGGTTGT CGCGGTCGCT CAACAACCGC AACGAGAGCC TTGCCGAGTT GCTCAAGACG GCCGGCGATG TCACCGGGAT CTTCAGCGAA CGTAGCCAAC AGGTCAACTC GCTGATCCTC AACTCCAACG ATCTGCTGGC GGTGCTGAAC GAACGCCGGT ACGCGATCAC GAGCCTGCTC AGATCGACGG CGGCGGTGTC GCGCGAACTG ACCGGGGTGG TCGCCGAGAA CGAGCAGGAG CTGGCGCCGA CGCTGAAACA CCTGAACGAG GTGATGGCGA TGCTGGAGAA GAACCGCGAC AACCTCGCCA AGATCCTGCC GGGCGCGGCG AAATACTATT TGACACAGGG CGAGATCGTG TCGAACGGTG CGTACTACAA CGCGCTGGTG CCGAACATCC AACCGGCGCA GCTTCTGCAG CCCTTCCTCG ATTACGCCTT TGGATTCCGC CGCGGTATGG ACGCCGGCCA GCCGCCGGAC GACGCCGGAC CGCGGGCCGA GCTTCCCTTC CCGATCAACG CCATTCCGCA GCCAGGAGAC CTTCCCGATG ACGGCACCCC GTAA
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Protein sequence | MDKYRGSQLI KAGIIGVVLM ILVIMIGLQP IRLLSWATAL RYQALFTEAG GIAGGNDVTV SGLKVGQVSS VELVNGDALV SFTVDGKYAL GSDTTAHIRT GTLLGERVLA LESEGSGTLD RDQPIPTSRT SSPFSLTDAV SELTANTAET DTDSLNRSLD TLSETLDQIA PQLGPTFDGV SRLSRSLNNR NESLAELLKT AGDVTGIFSE RSQQVNSLIL NSNDLLAVLN ERRYAITSLL RSTAAVSREL TGVVAENEQE LAPTLKHLNE VMAMLEKNRD NLAKILPGAA KYYLTQGEIV SNGAYYNALV PNIQPAQLLQ PFLDYAFGFR RGMDAGQPPD DAGPRAELPF PINAIPQPGD LPDDGTP
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