Gene Mjls_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3682 
Symbol 
ID4879393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3908041 
End bp3909144 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID640140991 
Productvirulence factor Mce family protein 
Protein accessionYP_001071950 
Protein GI126436259 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAT ACCGCGGGTC CCAACTCATC AAGGCAGGCA TCATCGGTGT CGTCCTGATG 
ATCCTCGTCA TCATGATCGG GCTGCAGCCG ATACGACTGC TGTCCTGGGC CACAGCCCTG
CGTTACCAGG CGCTGTTCAC CGAGGCCGGT GGCATCGCCG GCGGCAACGA CGTGACGGTG
TCCGGCCTCA AGGTCGGCCA GGTGTCGTCG GTCGAACTCG TCAACGGCGA TGCGCTGGTT
TCATTCACGG TCGACGGCAA GTACGCGCTG GGTTCCGACA CCACCGCGCA CATCCGCACC
GGAACCCTTC TCGGAGAGCG GGTGCTGGCG CTGGAGTCCG AGGGAAGCGG CACGCTGGAC
CGCGACCAGC CCATCCCCAC GTCGCGTACG TCGTCGCCGT TTTCGTTGAC CGATGCGGTC
AGTGAGCTGA CGGCCAATAC CGCAGAGACC GACACAGATT CGCTCAACCG ATCGTTGGAC
ACTCTCTCGG AGACGCTCGA CCAGATCGCC CCACAGCTCG GTCCGACATT CGACGGGGTC
TCCCGGTTGT CGCGGTCGCT CAACAACCGC AACGAGAGCC TTGCCGAGTT GCTCAAGACG
GCCGGCGATG TCACCGGGAT CTTCAGCGAA CGTAGCCAAC AGGTCAACTC GCTGATCCTC
AACTCCAACG ATCTGCTGGC GGTGCTGAAC GAACGCCGGT ACGCGATCAC GAGCCTGCTC
AGATCGACGG CGGCGGTGTC GCGCGAACTG ACCGGGGTGG TCGCCGAGAA CGAGCAGGAG
CTGGCGCCGA CGCTGAAACA CCTGAACGAG GTGATGGCGA TGCTGGAGAA GAACCGCGAC
AACCTCGCCA AGATCCTGCC GGGCGCGGCG AAATACTATT TGACACAGGG CGAGATCGTG
TCGAACGGTG CGTACTACAA CGCGCTGGTG CCGAACATCC AACCGGCGCA GCTTCTGCAG
CCCTTCCTCG ATTACGCCTT TGGATTCCGC CGCGGTATGG ACGCCGGCCA GCCGCCGGAC
GACGCCGGAC CGCGGGCCGA GCTTCCCTTC CCGATCAACG CCATTCCGCA GCCAGGAGAC
CTTCCCGATG ACGGCACCCC GTAA
 
Protein sequence
MDKYRGSQLI KAGIIGVVLM ILVIMIGLQP IRLLSWATAL RYQALFTEAG GIAGGNDVTV 
SGLKVGQVSS VELVNGDALV SFTVDGKYAL GSDTTAHIRT GTLLGERVLA LESEGSGTLD
RDQPIPTSRT SSPFSLTDAV SELTANTAET DTDSLNRSLD TLSETLDQIA PQLGPTFDGV
SRLSRSLNNR NESLAELLKT AGDVTGIFSE RSQQVNSLIL NSNDLLAVLN ERRYAITSLL
RSTAAVSREL TGVVAENEQE LAPTLKHLNE VMAMLEKNRD NLAKILPGAA KYYLTQGEIV
SNGAYYNALV PNIQPAQLLQ PFLDYAFGFR RGMDAGQPPD DAGPRAELPF PINAIPQPGD
LPDDGTP