Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3681 |
Symbol | |
ID | 4879392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 3906573 |
End bp | 3908057 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640140990 |
Product | virulence factor Mce family protein |
Protein accession | YP_001071949 |
Protein GI | 126436258 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.18631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCAC CCCGTAAGCG CCTGGCGGCC TGGACGGCGG TCCTGCTGGC CCTCGTGTTG GTCGCAGGCG CGGTTTTCCT GGTGCGAAAG CTGTACTTCG GGCCGAACAC CATCACGGCG TACTTTCCCA CCGCGACGGC GATCTATCCC GGCGACGAGG TCCGGGTGTC GGGCGTCAAG GTCGGCAAGA TCGAGGCCAT CACGCCCGAG GGCACCGAGA CGAAAATGCT TCTCAGCGTC GACCGCGACG TGCCGGTGCC GGCAGACGCC AAGGCGGTGA TCGTCGCGCA GAATCTGGTC GCGGAACGCT TCGTCGCGCT CACGCCCGCC TACCGCACCG GCGACGGACC GAAGATGCCC GACGGCGGGG TGATCCCCAG CGACCGAACC GCGGTTCCCG TGGAGTGGGA CGAAGTGAAG GAACAGTTGA CGCGCCTGGC TACCGCGCTG GGGCCGGAGG CCGGAGTGTC CGACACGTCC GTCTCGCGGT TCATCGACAG CGCGGCCGAT GCGTTGGATG GCAACGGCGA GAAACTCCGC GATACCCTGG CCCAACTCTC CGGAGTGGCC CGGGTTTTCG CCGAGGGCAG CGGGAACATC GTCGACATCA TCAAGAACCT GCAGATCTTC GTCACCGCCC TACGCGACAG CAAGCAGCAG ATCGTCCAGT TCGAGAATCG ACTGGCCACC CTGACCAGTG TGGTGAACGA CAGCAGGTCC GATCTGGACG CGGCTCTCTC TGAACTGTCG GTCGCGCTGG GCGAGGTGCA GCGCTTCGTC GCGGGCACCC GCGATCTGAC CGCCGAACAG ATTCAGCGAC TGGCCAACGT CACTCAGGTC CTCGTCGACA ACCGCACGGC ATTGGAGAAT GTCCTCCACA TCACACCCAA TGCGATCGCC AATTTCCAGA ACATCTACTA CCCGAACGGC GGAGCGGTGA CGGGTGCGTT CTCGCTTGTC AACTTTGCGA ACCCGGTGCA CTTCGTCTGC GGCCTGATCG GCGGCGTCGC CAACACCACC GCACCTGAGA CGGCGAAACT CTGCGCGCAG TACCTCGGTC CCGCATTGCG CCTGCTCAAC TTCAACAACA TTCCTCTGCC GATCAACGCC TACTTGAGGC CCGCGGTCAA TCCGGAGCGG ATCATCTACA CCGACCCGAA ACTCGCACCT GGGGGAGCAG GACCGGGCGA TCCACCCGAG CCGTTCCCGT CGGTGTCCGC CTACCTCGGA GCCGGGGACA TCCCGCCGCC TCCGGGCTGG AATCAACCGC CGGGTCCCCC CGGGCTTTAT ACGCCGGACG ACGACGCACC GGCCATCCCA TCACCGGCGT TGTACCCCGG CGCCCCGATC CCAGCGCCGC CGAACGTGTT GAGCAACATC GCGCCGGGAC CGCAGACAGT CGATGGGATG CTGCTTCCGC CCACCCCGGC GCCGGCCAAC CCGCCGCCGC CCAGCGGGCC GCCGCTGCCT GCGGAGGCTC CGTGA
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Protein sequence | MTAPRKRLAA WTAVLLALVL VAGAVFLVRK LYFGPNTITA YFPTATAIYP GDEVRVSGVK VGKIEAITPE GTETKMLLSV DRDVPVPADA KAVIVAQNLV AERFVALTPA YRTGDGPKMP DGGVIPSDRT AVPVEWDEVK EQLTRLATAL GPEAGVSDTS VSRFIDSAAD ALDGNGEKLR DTLAQLSGVA RVFAEGSGNI VDIIKNLQIF VTALRDSKQQ IVQFENRLAT LTSVVNDSRS DLDAALSELS VALGEVQRFV AGTRDLTAEQ IQRLANVTQV LVDNRTALEN VLHITPNAIA NFQNIYYPNG GAVTGAFSLV NFANPVHFVC GLIGGVANTT APETAKLCAQ YLGPALRLLN FNNIPLPINA YLRPAVNPER IIYTDPKLAP GGAGPGDPPE PFPSVSAYLG AGDIPPPPGW NQPPGPPGLY TPDDDAPAIP SPALYPGAPI PAPPNVLSNI APGPQTVDGM LLPPTPAPAN PPPPSGPPLP AEAP
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