Gene Mjls_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3642 
Symbol 
ID4879353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3849769 
End bp3851133 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content71% 
IMG OID640140949 
Productmajor facilitator transporter 
Protein accessionYP_001071910 
Protein GI126436219 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.266137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAC ACGCGCCGAA ACCCCCGCCC TCGGCGCCGA CCGCCGGCCG AGCCCGCATC 
GTCGCGTGGG CCCTGTGGGA CTGCGGGAAC ACCGGGATGA ACGCGATCGT CGCGACGTTC
GTGTTCGCGG TGTACCTCAC CGGCGCGGTG GGTTCGGATC TTCCCGGCGA CACCTCGGCC
ACCAGTTGGC TGGGCCGCGC GATGACCGTG GCCGGTCTGG TGGTGGCGGT GCTGGCCCCG
GTGACCGGGG TGTGGGTGCA GGCCCCACGC CGGCGACGGG TGGTGCTGAC CGTGCTGACC
GGCACCGCGG TCCTGCTCAC GGCGTCGATG AGCCTGATCC GCGACGACCA CCGCTACCTG
TGGGCGGGTC TGGTGCTGCT GGCCTGCACC GCGGCGTGCG GCGATCTGGC CAGCGTCCCC
TACAACGCGA TGCTGCGGCA GTTGGCCGGC CCGCAGCGGT CGGGACGGAT CTCCGGAATA
GGCTGGGCGT CAGGCTATCT CGGCAGCGTC TTCCTGCTGC TGCTGGTGTA CGTGGGTTTT
GTCTCCGGCG ACGGCGACAC CCGTGGCCTG CTCGGCATCC CGGTTTCCGA CGGTCAGAAC
ATCCGCGCGG CGATGCTGCT TGCCGCCGCC TGGTTCCTGC TCTTCGCGCT GCCCCTGCTG
CTCACGGTGC CGCCACATCT GCCCGGCGCC GACGAGGTCG ACCCGGATCA GCCCTCCGGG
GTGTTCGCCG CCTACCGCAG GCTGTGGACG GAGATCGCCG GCGAATGGCG GCGCGACCGC
AACATCGTCT ACTACCTGCT CGCCAGTGCG GTGTTCCGCG ACGGACTCGC CGGGGTGTTC
GCCTTCGGTG CGGTGCTCGG GGTGAGCGTC TACGGCATCT CCGAGGCCGA CGTCCTGCTG
TTCGGTGTGA GCGCATGTGT GGTGGCCGCG GTCGGGGCGG TCATCGGTGG TCTGATCGAC
GACCGGGTGG GCTCGAAACC GGTGATCGTG GTGTCGCTGA CCGCGATGAT CGCGGTCGGT
CTGACGCTGC TGAGCCTGTC GGGCCCGTCG GCGTTCTGGG TGTGCGGTCT GCTGCTGTGC
CTGTTCATCG GCCCGACGCA GTCCTCGGCA CGCACGTTGA TGCTGCGGAT GTCGCCGCCC
GGTAAGGAGG GTGTCGCGTT CGGCCTCTAC ACCACGACGG GCCGGGCGGT GGCGTTCCTC
GCGCCGTGGC TGTTCTTCAT GTTCATCGAC CTGTTCGACA GCGACCGCGC GGGCATGGCG
GGGCTGTGCG TGGTGCTGGC CGCCGGGCTG GCGGCCATGC TCGCGGTGCG CGCACCGCAC
CGCCGGCCGG CGTTAGCGCA TGCCGACGCA GAAGGTCAGC CCTGA
 
Protein sequence
MTQHAPKPPP SAPTAGRARI VAWALWDCGN TGMNAIVATF VFAVYLTGAV GSDLPGDTSA 
TSWLGRAMTV AGLVVAVLAP VTGVWVQAPR RRRVVLTVLT GTAVLLTASM SLIRDDHRYL
WAGLVLLACT AACGDLASVP YNAMLRQLAG PQRSGRISGI GWASGYLGSV FLLLLVYVGF
VSGDGDTRGL LGIPVSDGQN IRAAMLLAAA WFLLFALPLL LTVPPHLPGA DEVDPDQPSG
VFAAYRRLWT EIAGEWRRDR NIVYYLLASA VFRDGLAGVF AFGAVLGVSV YGISEADVLL
FGVSACVVAA VGAVIGGLID DRVGSKPVIV VSLTAMIAVG LTLLSLSGPS AFWVCGLLLC
LFIGPTQSSA RTLMLRMSPP GKEGVAFGLY TTTGRAVAFL APWLFFMFID LFDSDRAGMA
GLCVVLAAGL AAMLAVRAPH RRPALAHADA EGQP