| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3637 |
|---|
| Symbol | |
|---|
| ID | 4879348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 3845900 |
|---|
| End bp | 3846523 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640140944 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001071905 |
|---|
| Protein GI | 126436214 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.262942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGA CGTCAGTCGC GAGCACCCGC CGCAGCCGGG CGAAGTCGGA CCGTCGCAGC
CAGCTGATCG CCGCGGCGGA ACGCCTTGTC GCCGAGAAGG GTTACCTCGC GGTGCGCCTC
GAGGACATCG GCTCGGCGGT CGGCGTCAGC GGACCCGCGA TCTACCGGCA CTTCCCCAAC
AAAGAGGCGA TGCTCGTCGA ACTGCTCGTG GGCATCAGCA CCCGGCTGCT GGCCGGTGCG
CGCGAAGTGC TGACCGACTC CCCGGACGCG GAGACCGCCC TCGACGGGCT GATCGACTTC
CATCTCGACT TCGCGCTCGG CGAGTCCGAC CTCATCCGGA TCCAGGACCG GGACCTCGGC
CATCTGCCGG ACCCCGCCAA ACGACAGGTG CGCAGAGCGC AGCGCCAGTA CGTGGAGATC
TGGGTGGAGG TGCTGCGGGC CGTCGACCCC TCGCTCGACG AGGCTCAGGC CCGGCTGATG
GCCCACGCGG CGTTCGGGCT CCTCAACTCC ACACCGCACA GCGTCAAACC CGGGGCAACC
AAAACGGCCG AGGCCAGCTC GCGCACTGTC CTTCGAGCGA TGACAGTGGC GGCGCTGGCC
TCGGCCGGTC GGCTACAGGG TTAA
|
|---|
| Protein sequence | MAPTSVASTR RSRAKSDRRS QLIAAAERLV AEKGYLAVRL EDIGSAVGVS GPAIYRHFPN
KEAMLVELLV GISTRLLAGA REVLTDSPDA ETALDGLIDF HLDFALGESD LIRIQDRDLG
HLPDPAKRQV RRAQRQYVEI WVEVLRAVDP SLDEAQARLM AHAAFGLLNS TPHSVKPGAT
KTAEASSRTV LRAMTVAALA SAGRLQG
|
|---|
| |