| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3616 |
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| Symbol | |
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| ID | 4879327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 3816203 |
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| End bp | 3817822 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640140922 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001071884 |
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| Protein GI | 126436193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.381116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAA TGGTTCACCC CCCGACAGCT GACCAGCCCT GGTGGTCGCG CGCGGTGTTC
TACCAGGTCT ATCCCCGGTC CTTCCACGAC AGCGACGGCG ACGGTGTCGG CGACCTCGAC
GGCGTGACCG CCAAACTCGA CTATCTGAGT GAACTCGGCG TCGACGCTCT GTGGCTCAAC
CCGGTCACTG TCTCCCCCAT GGCCGACCAC GGCTACGACG TCGCCGACCC CCGCGACATC
GACCCGCTGT TCGGCGGCAT CGACGCCCTG GACCGGCTCA TCGCCGCCGC GCACGACCGC
GGTATCCGCA TCACCATGGA TCTGGTGCCC AACCACACCA GCTCGGCGCA CCCGTGGTTC
CAGGCGGCGC TGGCGGCGGG TCCGGGCAGC GCCCAGCGGG AGCGCTACAT CTTCCGGGAG
GGCACCGGTC CCGACGGGCT GCTCCCGCCC AACAACTGGA TTTCCGTCTT CGGCGGGCCC
GCGTGGACGC GGATCGTCGA ACCCGACGGG CAGCCCGGCC AGTGGTACCT GCACCTGTTC
GACCCCGAGC AGCCCGACCT CAACTGGGAC AACCCCGAGG TCTTCGAGGA TCTCGAGAAG
ACGCTGCGCT TCTGGCTCGA CCGCGGCGTC GACGGTTTCC GCATCGACGT GGCGCACGGG
ATGGCCAAAC CGCCGGACCT GCCCGACATG GAGATCGCCG AGAACAGGAT GCTCGCCGAG
ACCGCCAGCG ATCCGCGGTT CGACCACCAG GGCGTCCACG ACATCCACCG CAACATCCGC
TCCGTGCTCG ACGACTATCC CGGCGCGGTC GCCGTCGGCG AGGTGTGGGT CTACGACAAC
GCCGCGTTCG CCGCCTACCT GCGGGCCGAC GAACTGCATC TGGGCTTCAA CTTCCGGCTG
GTGCGCGCCG ACTTCGACGC CGACGAGATC CACGACGCGA TCGAGAACTC GCTGGCCGCC
GTCGCCCTGG AAAACGCGAC GCCGACGTGG ACGCTGTCCA ACCACGACGT CGAGCGGGAG
GTCACCCGGT ACGGCGGCGG GGCGCTCGGG CTGGCGCGGG CCCGGGCGAT GGCCCTGGTG
ATGCTGGCGC TGCCCGGCGT GGTGTTCGTC TACAACGGCG AAGAACTCGG CCTGCCCAAC
GTCGACCTGC CCGACGAAGT GCTTCAGGAC CCGGTGTGGG AACGCTCCGA CCGCACCGAA
CGCGGGCGCG ACGGATGCCG CGTGCCGATG CCGTGGAGCG GTGACGCTCC CCCGTTCGGG
TTCTCGACGA CGGCCGACAC CTGGCTGCCG ATGCCGGCGG AATGGTCGTC GCTGACCGTC
GAACGCCAGC TGGCCGAGCC GGACTCCGTG CTGCACTTCT TCCGCCGGGC GCTGCGCCTG
CGCCGGGACC GCTGTGGCGT CGACGGGGCG ACGCTGACGC AGCTGTCCGC CGAGGACGGG
GTGGTGACGT TCCGCACCGA CGGCGGACTC ACCTGTGTGC TCAACGCCGG TGAGCGCCCG
GTCGACCTGC CCCCCGGTGA GGTGCTGCTC GCCAGCGCGC CCCTGCAGGC ACCTTCCCCG
TCGCTTCGCT CGACCCAGGA TCGGCGGCTA CCCCCCGACA CGGCCGCCTG GGTGGTCTAA
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| Protein sequence | MGAMVHPPTA DQPWWSRAVF YQVYPRSFHD SDGDGVGDLD GVTAKLDYLS ELGVDALWLN
PVTVSPMADH GYDVADPRDI DPLFGGIDAL DRLIAAAHDR GIRITMDLVP NHTSSAHPWF
QAALAAGPGS AQRERYIFRE GTGPDGLLPP NNWISVFGGP AWTRIVEPDG QPGQWYLHLF
DPEQPDLNWD NPEVFEDLEK TLRFWLDRGV DGFRIDVAHG MAKPPDLPDM EIAENRMLAE
TASDPRFDHQ GVHDIHRNIR SVLDDYPGAV AVGEVWVYDN AAFAAYLRAD ELHLGFNFRL
VRADFDADEI HDAIENSLAA VALENATPTW TLSNHDVERE VTRYGGGALG LARARAMALV
MLALPGVVFV YNGEELGLPN VDLPDEVLQD PVWERSDRTE RGRDGCRVPM PWSGDAPPFG
FSTTADTWLP MPAEWSSLTV ERQLAEPDSV LHFFRRALRL RRDRCGVDGA TLTQLSAEDG
VVTFRTDGGL TCVLNAGERP VDLPPGEVLL ASAPLQAPSP SLRSTQDRRL PPDTAAWVV
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