Gene Mjls_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3602 
Symbol 
ID4879313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3803503 
End bp3805185 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content70% 
IMG OID640140908 
Productsodium/hydrogen exchanger 
Protein accessionYP_001071870 
Protein GI126436179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.69451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTCA TCCTCGTCGT CGTCGGCGCC ATCGTGGTCA CCGCCATCGC CCACCGCCGC 
GGGCTGGAAC CCGCACTCGT CCTCGTCGTC GTCGGGTTCG CGGTGTCCTT CGCGCCCGAC
TTCAACGGCA TCGAACTGGA ATCCGATGTG CTGCTGTCGG TGGTGCTGCC ACCGCTGCTC
TACTCGGCGG CGCTGAGCTT CTCGTTCCCG ACGTTCCTGC GCAACATCCG GCCGATCCTC
GGCCTCGGTG TGGGGCTGGT GGTGATCACC ACCTTCGCCG TGGCCGGGCT GGCGTCGTGG
CTGGTGCCGT CGCTGACATT CGGGACCGCC CTGATTCTCG GCGCGGTGGT GGCGCCACCC
GATGCGGTGA CCGCCGTCGC GGTGGGCCGC CGGCTCGGAC TGCCGAAGAA GGTGATGGCG
ATCCTCACCG GCGAGAGCCT GGTCAACGAC GCCGCCGCGC TGTCGCTGTT CTCGATCGCG
GTGGCCCAGG TGGCCGGCAC CCGCGCGTTC ATCGAGAACC CGGTGCTGTT GTTCGGCTAC
AGCGCGCTGC TCGGCCCCGT CGTCGGCGCC GCGCTGGGCT TCATCACGCT GTGGATCCGC
CGCCGCCTGG CCAATCCGGG ACTGGAGACG ATCCAGGGAT TGGTGGTGCC GTTCGCGGCG
TTCATCTCCG CCGAGCACCT GCACGCCTCC GGCGTGCTGG CCGTCGTGGT CGCCGGATTC
GTCGTCGGCC ACGGTTCACT CGACGCCGGT TACCAGACCC GGCTGCAGGA GCGCTACGTG
TGGAACTCCG TCGACGTCAT GCTCGAGGCG TTCGTGTTCG CCTACATCGG ATTACAGCTG
CGCTTCGTGC TCGAGGACCT CAACGAGGCG CACGAGTCAC TGGCCGAAGT CGCGGTGGCG
TCCGCCGTCG TGCTGCTGGT GGTGCTGCTG ATCCGGCCGG TGTGCGTGTT CGCGATGTTC
GGCCGCGGCG TGCTCTCCCG CAAGGTCGAG TCGAAGTTGA GCGTGCCGAA ACCCGAACAG
GGCGGCCGGG GCGCGCTGGG GGTGCGCCGC CGGGGTGGGG CGGGCCGGCT GTCGGGGTTG
GTCGACCGCC GGATGCTGAC GTGGCAGGAG AACGTCGTGG TGTCGTGGAC CGGGATGCGC
GGGGTGGTGA CGCTCGCGGC CGCCTCGGGC ATCCCGATGA TGACGATCGA CGGCGAGCCG
TTCCCCGAGC GCGCCACCAT CCAGGCGATC GCGTTCGTCG TCAGTGTCGG CACCCTGCTG
CTGCAGGGAT GGACGCTGCC GCCGCTGATC CGTTGGCTGC AACCGTCATT CGAGCACGAC
CGCCAGTCCG ACGAGACCGA GACCCGCAAG GCCGAACAGG TGGTGCACGC CGCCGCCGAC
GACGTGCTGA ACCGGTTCGC CGACGCACCG CCGCCCGGAC TCGACGACGC GACGCTGGCC
AACATCCGGC AGACCATCGC CCGGCACGCC CAGGACGCCG ACGAGATGCC CGACCCGGAA
TCGCATACGC CCCGCGCCGA GGTCTTCTCC AAGCTCTACC GGGATGTGTT GTGCGCGCAG
CGCAATGCGC TGATCGCCGA ACGCGACGCC GGCCGCATCG AGGACGAGGC GGTGCGCGCC
ATGCTGGAGC GGCTCGACCT GCAGGAGGCC GGGGTGTCGG CGCGGCTGGA GAGCCGGATC
TGA
 
Protein sequence
MELILVVVGA IVVTAIAHRR GLEPALVLVV VGFAVSFAPD FNGIELESDV LLSVVLPPLL 
YSAALSFSFP TFLRNIRPIL GLGVGLVVIT TFAVAGLASW LVPSLTFGTA LILGAVVAPP
DAVTAVAVGR RLGLPKKVMA ILTGESLVND AAALSLFSIA VAQVAGTRAF IENPVLLFGY
SALLGPVVGA ALGFITLWIR RRLANPGLET IQGLVVPFAA FISAEHLHAS GVLAVVVAGF
VVGHGSLDAG YQTRLQERYV WNSVDVMLEA FVFAYIGLQL RFVLEDLNEA HESLAEVAVA
SAVVLLVVLL IRPVCVFAMF GRGVLSRKVE SKLSVPKPEQ GGRGALGVRR RGGAGRLSGL
VDRRMLTWQE NVVVSWTGMR GVVTLAAASG IPMMTIDGEP FPERATIQAI AFVVSVGTLL
LQGWTLPPLI RWLQPSFEHD RQSDETETRK AEQVVHAAAD DVLNRFADAP PPGLDDATLA
NIRQTIARHA QDADEMPDPE SHTPRAEVFS KLYRDVLCAQ RNALIAERDA GRIEDEAVRA
MLERLDLQEA GVSARLESRI