Gene Mjls_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3403 
Symbol 
ID4879115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3568435 
End bp3569334 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID640140706 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001071672 
Protein GI126435981 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.404542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC CCGCCGACCA CACCAGCCCC GAAACGCGAA TCGCGTCGTG GCGGTTGCTG 
CTCGGCAACC CCGTCACGGT CGTCAGCGCG GTCATCCTCG CGGTGGTCAT CGTCGTCGCG
CTGTTCGCAC AGTGGCTGAT CCCCTACGGC GTCAACGACA TCGACGTGCC GAACGCGTTG
CAGGCCCCCA GCGGCGCGCA CTGGTTCGGC ACCGACGAAC TCGGGCGCGA CGTGCTCTCA
CGCGTACTGG CCGCGATCCA GGCGTCGATG CGGGTGTCGG TGGTCAGCGT GTCGTTCGCG
GTCGTGGTCG GGGTGACCGT CGGTGTGGTC GCCGGATACC GCGGCGGGTG GCTGGACACC
GTGTTGATGC GCATCGTCGA CGTGATGTTC GCGTTCCCGG TGCTTCTGCT CGCGCTCGCG
GTGGTGGCGA TCCTCGGGCC GGGAGTGACG ACGACGATCT TGGCGATCGG CATCGTCTTC
ACGCCGATAT TCGCCCGGGT GGCCCGGGCG AGCACCCTGT CGGTGCGGGT GGAACCCTAT
GTGGCGGTGT CCCGCACGAT GGGCACCGGG CACCTCTACA TCCTGACCCG GCATGTGCTG
CCGAACATCT CGGGACCGCT GATCGTGCAG ACGTCGCTGT CGCTGGCGTT CGCGATCCTG
TCCGAGGCCG CGCTGTCGTT CCTCGGTCTG GGTATTCAAC CGCCCCAGCC GTCGCTGGGT
CGGATGATCT TCGACTCGCA GGGTTTCGTG ACGCTGGCGT GGTGGATGGC GGTGTTCCCC
GGCGCGGCGA TCTTCGTCAT CGTCCTGGCG TTCAACCTCC TCGGCGACGG GCTGCGCGAT
GTGCTGGATC CCAAGCAGCG CACCATGATC GAGGCACGCG CACGCGAGGA GCGAGAATGA
 
Protein sequence
MSAPADHTSP ETRIASWRLL LGNPVTVVSA VILAVVIVVA LFAQWLIPYG VNDIDVPNAL 
QAPSGAHWFG TDELGRDVLS RVLAAIQASM RVSVVSVSFA VVVGVTVGVV AGYRGGWLDT
VLMRIVDVMF AFPVLLLALA VVAILGPGVT TTILAIGIVF TPIFARVARA STLSVRVEPY
VAVSRTMGTG HLYILTRHVL PNISGPLIVQ TSLSLAFAIL SEAALSFLGL GIQPPQPSLG
RMIFDSQGFV TLAWWMAVFP GAAIFVIVLA FNLLGDGLRD VLDPKQRTMI EARAREERE