Gene Mjls_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3324 
Symbol 
ID4879036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3483828 
End bp3485717 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content67% 
IMG OID640140625 
Productdihydrolipoamide acetyltransferase 
Protein accessionYP_001071593 
Protein GI126435902 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.295161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGA CATTCGACCC GATACGACTG AGCCGTTCGA GGGAGTCACA ACACATGGCC 
GTCTCTGTTC AGATGCCCGC ACTCGGTGAG AGCGTCACCG AAGGCACCGT CACCCGGTGG
CTCAAGCAAG AGGGTGACAC GGTCGAACAG GACGAACCCC TACTCGAAGT GTCGACCGAC
AAGGTCGACA CCGAGATCCC GTCCCCGGCC TCCGGCGTGC TGCAGAAGAT CGTGGCGCAG
GAAGACGACA CCGTCGAGGT CGGCGGGGAA CTCGCCGTGA TCGGCGAGGG CGGCGAGGAT
TCGGGCGACT CCTCCGACGA CTCGTCTTCC GACGAGGACG AGGACGAGGA GCCTGCGGAG
GAAGCGGAGT CGGAGACCAC CTCCGAGGAG TCCGACAGCT CCGAGGAGAC CGACAGCTCC
GAAGAGACCG AGAGCGAGCC GGAACCCGAA CCGGAGCCGA AGAAGGAGTC GAAGCCGAAG
CCGAAGTCCT CGGGTTCGGC GACCCCGGTG ACGATGCCCG AGCTGGGTGA GTCCGTCACC
GAGGGCACGG TCACCCGGTG GCTCAAGAAG GTCGGCGACA GCGTCGAGGT CGACGAACCG
CTGCTGGAGG TGTCGACCGA CAAGGTGGAC ACCGAGATCC CCTCGCCGGT CGCGGGCACC
CTGCTCGAGA TCATCGCCGA GGAGGACGAC ACGGTCGAGG TCGGCGGGGA ACTCGCGAAG
ATCGGCGATG CCGATCAGGC CGAGGCCGAA GAGCCCGAAC CGGAGCCGGA ACCCGAGCCG
GAGCCGGAGC CCGAACCCGA ACCGGAACCC GAGCCGAAGC AGGAGTCCAA GCCGGAGCCG
AAGCCCGAGC CCAAACAGGA GTCCAAGCAG GAAGCCAAGC CCGAGCCCAA GAAGGAGCCC
GAGCCGCAGC AGGATGCCGA GCCGTCCGAC GGCAGCGGCC CGTACGTCAC GCCGCTGGTG
CGCAAACTGG CCGCCGAGCA CGACGTGGAC CTGGCCGCCG TCAAGGGCAC CGGAGTCGGC
GGACGCATCC GCAAGCAGGA CGTCCTGGCG GCGGCCGAGG CCGACAAGAA GGCCAAGTCC
GGCCCCGAGG ACGCCGCCGA GGCACCCGGG AAGGCGCCGG CCGCGGCGAC GGCATCCGCG
AACGCCTCGG ACGCACCGCT GGCTCACCTG CGCGGCACCA AGCAGAAGGC CAACCGGATC
CGTCAGCTGA CCGCGAAGAA GACGCGCGAA TCCCTGCAGG CGACAGCGCA GTTGACGCAG
ACCCACGAGG TCGACATGAC CAAGATCGTG GCGTTGCGGG CCAAGGCGAA AAACGACTTC
GCCGAGCGCG AGGGCGTCAA CCTGACCTAT CTGCCATTCA TCGCCAGGGC GGTCATCGAC
GCGCTCAAAC AGCATCCGAA CGTCAACGCC AGCTACAACG AGGACACCAA GGAGATCACC
TACTACGACG CCGAGCACCT CGGCTTCGCG GTGGACACCG ATCAGGGTCT GCTCTCGCCG
GTTATCAAGA ACGCCGGTGA CCTCTCGCTG GCCGGGCTGG CCCGCGCGAT CGCCGACATC
GCCGCGCGTG CCCGCTCCGG TGACCTCAAA CCGGACGAAC TGTCCGGCGG CACCTTCACG
ATCACCAACA TCGGCAGCCA GGGCGCCCTG TTCGACACGC CGATCCTGGT GCCGCCGCAG
GCGGCGATGC TGGGCACCGG TGCGATCGTC AAACGGCCGC GGGTGATCGT CGACGAGTTC
GGCAACGAGT CGATCGGCGT GCGGTCGATC TGCTACCTGC CGCTGACCTA CGACCACCGA
CTCATCGACG GTGCCGACGC CGGTCGCTTC CTGACCACCA TCAAGCGCCG ACTCGAAGAG
GGTTCGTTCG AGGCAGACCT GGGTCTGTAA
 
Protein sequence
MGVTFDPIRL SRSRESQHMA VSVQMPALGE SVTEGTVTRW LKQEGDTVEQ DEPLLEVSTD 
KVDTEIPSPA SGVLQKIVAQ EDDTVEVGGE LAVIGEGGED SGDSSDDSSS DEDEDEEPAE
EAESETTSEE SDSSEETDSS EETESEPEPE PEPKKESKPK PKSSGSATPV TMPELGESVT
EGTVTRWLKK VGDSVEVDEP LLEVSTDKVD TEIPSPVAGT LLEIIAEEDD TVEVGGELAK
IGDADQAEAE EPEPEPEPEP EPEPEPEPEP EPKQESKPEP KPEPKQESKQ EAKPEPKKEP
EPQQDAEPSD GSGPYVTPLV RKLAAEHDVD LAAVKGTGVG GRIRKQDVLA AAEADKKAKS
GPEDAAEAPG KAPAAATASA NASDAPLAHL RGTKQKANRI RQLTAKKTRE SLQATAQLTQ
THEVDMTKIV ALRAKAKNDF AEREGVNLTY LPFIARAVID ALKQHPNVNA SYNEDTKEIT
YYDAEHLGFA VDTDQGLLSP VIKNAGDLSL AGLARAIADI AARARSGDLK PDELSGGTFT
ITNIGSQGAL FDTPILVPPQ AAMLGTGAIV KRPRVIVDEF GNESIGVRSI CYLPLTYDHR
LIDGADAGRF LTTIKRRLEE GSFEADLGL