Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3300 |
Symbol | |
ID | 4879012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 3459256 |
End bp | 3461148 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640140601 |
Product | hypothetical protein |
Protein accession | YP_001071569 |
Protein GI | 126435878 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.906388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.18719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGG GCAGCGTCGG TGCCGTCGGG GGCGCGGCCG AGCAGCTGTC GTTCGACATG GAGGCGCTGT CGCTGCGCGA CACCACGTTC GTCGTCGTGG ACCTGGAGAC CACCGGCGGT CGCGCCACGG GTGAGCGTCC GGATGCGATC ACCGAGATCG GCGCGGTCAA GGTCCGCGGC GGTGAGGTGC TCGGTGAGCT CGCCACCCTG GTCGACCCCG GGCGGGCGAT ACCGCCGCAG ATCGTCTCGC TGACCGGCAT CACCACCGCG ATGGTGTGCG CCGCCCCCCG CATCGAATCG GTGCTGCCCG CATTCCTCGA GTTCGCGCGC GGCTCGGTGC TGGTGGCCCA CAACGCCGGC TTCGACATCG GCTTCCTGCG GGCGGCGGCC GAACAGTGCG GGCTGACCTG GCCCCGCCCG CCGGTGCTGT GCACGGTCAA GCTCGCGCGC CGCGTGCTCA CCCGCGACGA GGCGCCCAGC GTGCGGCTGT CAGCGCTGGC GCAGTTGTTC CGCGCGAAGA CGACGCCGAC GCACCGGGCC CTCGACGATG CCCGCGCCAC GGTGGACGTA CTGCACGGGC TGATCGAACG GATCGGCAAC CAGGGCGTGC ACACCTACAC CGACCTGCGC GCCTACCTGC CCGACGTCAC CCCCGCGCAG CGCCGCAACC GCCGCCTCGC CGACGGTCTG CCCCACCGGC CGGGGGTGTA CCTGTTCCGC GGCCCGGGCG ACGAGGTGCT CTACATCGGC ACCGCGGTGG ACCTGCGCCG CCGCGTCGGC CAGTACTTCA CCGGAGCCGA TCCGCGGGCG CGGATGAAGG AGATGGCGTC CCTGGCCACC CGCGTGGACC ACGTGGAATG CGCCCACGAA CTCGAGGCGG GCGTGCGTGA GCTGCGCCTG CTGGCCGCCC ATGCGCCGCC CTACAACCGG CGTTCGAAGT TCCCGCAGCG CTGGTGGTGG GTGGTGCTGA CCGACGAGCC CTTCCCGCGG TTCTCGGTCG TGCGCGCACC CCGTCACGGT TCGGCGGTCG GGCCGTTCCG GGCCCGCACG GACGCCGTGC AGACCGCTGA ACTGCTCGCC CGGTTCACCG GTGTGCGGAC CTGCACCGCC CGGCTCGCCC GCGCGGCCCG GCACGGCGCG GCCTGCGCCG AGCGTGAACT GTCACCGTGC CCGGCGCCGC GCGACATCGA CGCGGCGGCC TACGCCCCGG CCCACCGCCG CGCCGCCGAC CTCATCGAGG GCCGCGACGA TGCGGCGCTG GCCGCGGTGG TCGACGGGAT CGCCGCGCTG GCGGCCGTCA ACCGGTACGA ATCGGCCGCG CGCCTGCGTG ACCACGCCGC CACGGGCATC GACGTGCTGT GGCGGGGGCA GCGACTGCGT GCGCTCGCCG ACCAGACCGA GTTGGTCGCG GCCCGTCCGG ACGGCAGCGG TGGATGGGAC CTCGCCGTCG TGCGGTACGG ACGCCTGGCC GCCGCCGGGT GCGCCCGTCG CGGGGTGCCG CCGATGCCGG TCGTCGACGC GCTGACCGCC GCGGCGCAGA CGGTGCTGCC CGATCCCGCC CCGCTGGGCG GTGCGCTGGT CGAGGAGACC GGGCTGATCG CCCGCTGGCT CACCAGCCCC GGTGTGCGGA TCGTGCGGTG CGAGCCCGGG TACGCCACAC CGATCGGCGC GGCGGGCCGC TGGCTGGGCT GGGCGGATAC GGCGCGTTCG GCACGGTTGG CCGCCGAGCA GACCGGTGCG GACGCGAGGA CCAGAGAGTC GGTCCCTTCA GAGCTTCTGG GTGAACCGCA CCCAACGCGC GAGCAGCTTT TCGGCCGCAC CGGAGTCAAT GGTCTCGGTC GCCCGGGCCA GGCCCGCCTC CCAGGCCGGC ACCCATTTGG CGTCGCTGGA TAG
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Protein sequence | MGQGSVGAVG GAAEQLSFDM EALSLRDTTF VVVDLETTGG RATGERPDAI TEIGAVKVRG GEVLGELATL VDPGRAIPPQ IVSLTGITTA MVCAAPRIES VLPAFLEFAR GSVLVAHNAG FDIGFLRAAA EQCGLTWPRP PVLCTVKLAR RVLTRDEAPS VRLSALAQLF RAKTTPTHRA LDDARATVDV LHGLIERIGN QGVHTYTDLR AYLPDVTPAQ RRNRRLADGL PHRPGVYLFR GPGDEVLYIG TAVDLRRRVG QYFTGADPRA RMKEMASLAT RVDHVECAHE LEAGVRELRL LAAHAPPYNR RSKFPQRWWW VVLTDEPFPR FSVVRAPRHG SAVGPFRART DAVQTAELLA RFTGVRTCTA RLARAARHGA ACAERELSPC PAPRDIDAAA YAPAHRRAAD LIEGRDDAAL AAVVDGIAAL AAVNRYESAA RLRDHAATGI DVLWRGQRLR ALADQTELVA ARPDGSGGWD LAVVRYGRLA AAGCARRGVP PMPVVDALTA AAQTVLPDPA PLGGALVEET GLIARWLTSP GVRIVRCEPG YATPIGAAGR WLGWADTARS ARLAAEQTGA DARTRESVPS ELLGEPHPTR EQLFGRTGVN GLGRPGQARL PGRHPFGVAG
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