Gene Mjls_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3271 
Symbol 
ID4878983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3429715 
End bp3431208 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content73% 
IMG OID640140572 
ProductUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 
Protein accessionYP_001071540 
Protein GI126435849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.893742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.486218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAC TGACCCTGGC CCGGGTGGCC GAGATCGTCG GCGGCCGGCT GGCCGACATC 
ACCCCCGAGG ACGCCGCCGC CACCCGGATC ACCGGAACCG TCGAATTCGA CTCGCGCGCC
GTCACGGCCG GCGGGCTGTT CCTGGCGCTG CCGGGTGCCC GCTCCGACGG CCACGACTTC
GCCGCGGCCG CCGTCGCCGC GGGGGCCGCG GCGGTGCTGG CCGCCCGTCC GGTCGGCGTG
CCCGCCGTCG TCGTCCCTCC CGCCGCGGGG CCCGAGGGCT CCGGTGTGCT CGAACACGAC
ACCGACGGCG CCGGTGCCGC GGTGCTGGCG GCGCTGGCCC GGTTGGCCGC CGCGGTCGCC
GCCGAACTGG TCGACGGCGG GCTGCGGATC GTCGGGATCA CCGGATCGTC GGGGAAGACC
TCGACGAAGG ATCTGGTGGC CGCCGTACTC GCCCCGCTGG GGGAGGTGAT CGCCCCGCCG
GGTTCGTTCA ACAACGAACT CGGTCACCCG TGGACGGTGC TGCGCGCCGA CCGCTCGACC
GACTTCCTGG TGCTGGAGAT GTCGGCGCGG CATCCGGGCA ACATCGCCGC GCTGGCCGCG
ATCGCCCCGC CGTCGATCGC GGTGGTGCTC AACGTGGGCA CCGCCCACCT CGGCGAGTTC
GGTTCGCGCG AGGCCATTGC CGCCACGAAA TCCGAACTGC CGCAGGCTGT TCCGGAATCC
GGTGTGGTGA TCCTCAATGC CGACGACAGT GCGGTCGCCG CGATGGCGGA GGTGACGGCG
GCCCGGGTGG TGCGGGTGTC GCGGGAACCC GGCGCCGACA TCTGGGCGGA CGCGGTGACG
CTCGACGAAC TCGCTCGCCC GCGTTTCACC CTGCACGCCG CGGGCGGTGA GGTGCCGGTG
AACCTCGCGG TGCACGGCGA CCACCAGGTG TCCAACGCAC TGTGTGCGGC CGCGGTCGCG
CTGGAATGCG GGGCCACCCT GGACCAGGTC GCGGCCGCGC TCGCCGGGGC CGGTCCGGTG
TCGCGGCACC GCATGCAGGT CACCACGCGC GAGGACGGCG TCACCGTGGT CAACGACGCC
TACAACGCGA ACCCGGACTC CATGCGGGCG GGGCTCAAGG CGCTGGCATG GATGAGTAGG
GGCGGCGCGG CCAAACGCCG GAGCTGGGCC GTGCTCGGCG AGATGGCCGA ACTCGGTGAC
GACTCGATAT CCGAGCACGA CAGCATCGGC CGACTGGCGG TGCGCTTAGA TGTGTCACGA
CTCGTCGTCG TAGGAACCGG GAGGTCGGCA AGCGCCATGC ATCAGGGGGC GGTCATGGAG
GGATCCTGGG GGGCGGAGGC CACCCGGGTC GATGACGCCG ACGCTGCGCT GGCGCTGTTG
AGCGACGAAC TGCAGCCCGG TGATGTCGTG CTGGTGAAGG CGTCGAACTC GGCGGGCCTC
GGTGCGCTGG CCGATTCGCT GACCGCCGGA CGTGACGGGA CCGCCACCCG ATGA
 
Protein sequence
MIELTLARVA EIVGGRLADI TPEDAAATRI TGTVEFDSRA VTAGGLFLAL PGARSDGHDF 
AAAAVAAGAA AVLAARPVGV PAVVVPPAAG PEGSGVLEHD TDGAGAAVLA ALARLAAAVA
AELVDGGLRI VGITGSSGKT STKDLVAAVL APLGEVIAPP GSFNNELGHP WTVLRADRST
DFLVLEMSAR HPGNIAALAA IAPPSIAVVL NVGTAHLGEF GSREAIAATK SELPQAVPES
GVVILNADDS AVAAMAEVTA ARVVRVSREP GADIWADAVT LDELARPRFT LHAAGGEVPV
NLAVHGDHQV SNALCAAAVA LECGATLDQV AAALAGAGPV SRHRMQVTTR EDGVTVVNDA
YNANPDSMRA GLKALAWMSR GGAAKRRSWA VLGEMAELGD DSISEHDSIG RLAVRLDVSR
LVVVGTGRSA SAMHQGAVME GSWGAEATRV DDADAALALL SDELQPGDVV LVKASNSAGL
GALADSLTAG RDGTATR