Gene Mjls_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3249 
Symbol 
ID4878961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3406571 
End bp3408190 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content70% 
IMG OID640140550 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001071518 
Protein GI126435827 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.710576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTCAC GATGGTCCGC GACGGTGCGC GGATTCGGTG CCCGCAGCCT GGCCGGACGG 
TTCCTGGTGT TCCAGCTGCT GGTGGTGGCG GTGGTGCTGC CGGCCGTGGC GGCGGTCTCG
ATCGCGCAGT CCACCCGGGA GTTCCGGGAA ACGCGCAGCC AACGCATGAT AGCGGTCGCC
GAGAACGTCG CGTCCACCCC GATCGTGCGG GACCGCTTGG CCGATCCGTT CGCCGCGCGG
GTACTGGCGC CGGAGGTGGA TCGGGCGGTG GCGCTCTCAG GTGCGGCGCT GGCGGAGATC
GTCGCTGCGG ACGGCACGGT GCTGGTGTCG TCGGATCCGT CGCGCGTCGG TAACCGGGTG
GACCTGAGCG TCACCCGCGC CGACGAGGGC CGGGCCTGGT ACGGCGACGA CGACATCGAC
GGTGTGCACA GCTTGATCGG GCACGTGCCG GTGCTGACCA ACCGGGGTGA GGTGCTGGCG
ATCGCGTCGG TCAGCGAACC GTATCCGTCG GTGTGGCAAC TGCTCAGCGT GGCCGGTGAA
CGGCTCGTGC TCTACCTCGG ACTGGCCGCG GCACTGGGGC TGGTGGCCTC GTGGCTGCTG
TCGCGGCGGA TCAAGCGACA CACCCGGGGC CTGGAGGTGG CCGAGATAGC CGGGCTGGCG
GATCACCGGG AAGCGTTGCT GCACAGCATC CGTGAGGGTG TGGTGGCCGT GAACACCGAC
GGTGTCATCA CCCTGCTCAA CGACAGCGCC CAGGAGTTGC TCGGACTCTC GGGGGCGGCG
GTGGGCCGGC GCGCCGATGC GGCGGGGCTC GATCCGGCGG TGGTCGAATT CCTGCTCTCC
GGTGAGGACG GCCGCGACGT CGTGATCGCC ACCCGCACCC GGGTGTTGGC GCTCAACCGG
CGCACCGCCT CGAGCGGGGG TGAGTGGATC GGTACGGTGA CCACGATGCG TGACAGCACC
GAACTGGCCG CTCTGCAGGC ACAGTTGTCG TCACACAAGA GCGTCACCGA CACGTTGCGC
GCGCAGACGC ACGAATTCGC CAACCAGTTG CACACCATCT CGGGGCTGGT TCAGCTGGGC
GAATACGACG CGGTGCGGGA TCTCATCGGC GAGTTGACGC GCCGGCGTGC GGAGATCAGC
GACGCGGTGA CCCGCCGGAT CGCCGACCCC GCGGTCGCGG CGCTGCTGAT CGCGAAGACC
ACGCTGGCCG CCGAGAGCGG GGTGACGCTG TGGCTCGACC CGGATTCGCA TCTCGGCGCA
TTGGATCCGG CGGCGGCGAC CGACGTGATC ACCCTGCTGG GCAACCTGAT CGACAACGCG
GTCGACGTAT CCGTGGGTTC GGGGGCGGCG CGGGTGAGCG TGCGCATCGA CGACGCCGAC
GGGCTGTCGA TCACCGTCGC CGACACCGGA CCCGGTGTGC CCGAACATCT CCGGGAAGAG
ATCTTCGCCC GCGGGGTGAC CTCGAAACCC GAGTCGCCGG GCGGTCGCGG GATCGGCCTG
GCACTGGTCC GGCTGGTCAC CGCCCAGCAC GGCGGCGTGG TGGACGTCTC CGACCGCGCA
GACGGTGGCG CAGTGTTCAC CGTGCGGTTG CCGCCCAGCC GGGTGGCTGC GCATGCGTGA
 
Protein sequence
MSSRWSATVR GFGARSLAGR FLVFQLLVVA VVLPAVAAVS IAQSTREFRE TRSQRMIAVA 
ENVASTPIVR DRLADPFAAR VLAPEVDRAV ALSGAALAEI VAADGTVLVS SDPSRVGNRV
DLSVTRADEG RAWYGDDDID GVHSLIGHVP VLTNRGEVLA IASVSEPYPS VWQLLSVAGE
RLVLYLGLAA ALGLVASWLL SRRIKRHTRG LEVAEIAGLA DHREALLHSI REGVVAVNTD
GVITLLNDSA QELLGLSGAA VGRRADAAGL DPAVVEFLLS GEDGRDVVIA TRTRVLALNR
RTASSGGEWI GTVTTMRDST ELAALQAQLS SHKSVTDTLR AQTHEFANQL HTISGLVQLG
EYDAVRDLIG ELTRRRAEIS DAVTRRIADP AVAALLIAKT TLAAESGVTL WLDPDSHLGA
LDPAAATDVI TLLGNLIDNA VDVSVGSGAA RVSVRIDDAD GLSITVADTG PGVPEHLREE
IFARGVTSKP ESPGGRGIGL ALVRLVTAQH GGVVDVSDRA DGGAVFTVRL PPSRVAAHA