| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3209 |
|---|
| Symbol | |
|---|
| ID | 4878922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 3364294 |
|---|
| End bp | 3364968 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640140511 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001071479 |
|---|
| Protein GI | 126435788 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCAG CACGTGTCTA TGGCGGGCTG TCCGCAACTC AACGCGATGC ACAGCGTCGC
GTGATGTTGA TTGATGCCGC GGTCTCAATC ATGGGCACCC ACGGAGCTAC CGCGTGCACC
GTGACCGCCG TGTGTGCGAA ATCAGGAGTG ACGAGCCGGT ACTTCTACCA ACAGTTTCGC
GATCGAGACG CGCTCTTGCG TGCGGTATTT GCCAAGATCT CCACTACCTT CCAAGCGGTG
ATAACCAGCG CCATTCCGGA CGACACGGTT GCTCCTCAAG AACTGGCTTA CGCTCCGATC
AAGGCCCTGG TTCAGGTGAT CGAGAACGAT CCCCGCATGG CCCGCATACT GTTTGTCGAG
TCGGGCGCAG AACCCCTCCT TCGGCAGCTG CGAAGCGATC TGATGACCGA TTTTGCGGAG
CTGGTGCTCA GAGAGGCCCG CTTGCACCTC GATATACCCA GCGATGTGCT CCAAGTCGCA
GATCTCGCCG CTACCTACGG TGTCGGGGGC CTGTTCGAGA TACTCCGTCG CTGGATAGAT
GGACAACTGA ACCTCTCGAC TGAAATGCTC ATCGAGCACT GTGCGGGTTT TCTCGGCATT
CTCGGCCTGT ATACCCTCGG ACAGGCGCCT GATCAGGCCG CTCCGCCGCT GGCCAAAGCC
GAGGAGACCC GATAG
|
|---|
| Protein sequence | MSPARVYGGL SATQRDAQRR VMLIDAAVSI MGTHGATACT VTAVCAKSGV TSRYFYQQFR
DRDALLRAVF AKISTTFQAV ITSAIPDDTV APQELAYAPI KALVQVIEND PRMARILFVE
SGAEPLLRQL RSDLMTDFAE LVLREARLHL DIPSDVLQVA DLAATYGVGG LFEILRRWID
GQLNLSTEML IEHCAGFLGI LGLYTLGQAP DQAAPPLAKA EETR
|
|---|
| |