Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3109 |
Symbol | |
ID | 4878822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 3251774 |
End bp | 3252916 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640140409 |
Product | RNA polymerase ECF-subfamily sigma factor |
Protein accession | YP_001071379 |
Protein GI | 126435688 |
COG category | [K] Transcription |
COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGGCCG CCCTCGCGGC GCCCACCGGC GACATCGCCG CGGCCGAGGA CGCGCTCGCC GATGCCTTCG AACGCGCGCT CCGGAGATGG CCGGTCGACG GTATCCCGGC CGAACCCGCC GCCTGGGTGA TCACCGTCGC CCGCAACAGA TTGCGCGACC GCTGGCGCTC GGCCGGTCAC CGCAGAGCCG CTCGTCTCGA CGAGAACCTC GACGTGACAG CGGAATCCGT CGACTGGCCG GCCATCCCGG ACAAACGCCT GGAGCTCATG CTGGTCTGTG CGCATCCCTC GGTGGCGGTC AACGTCCGTA CGCCGCTGAT GCTGCAGGTG GTCATGGGTG TCGACGCGGC GGCGATCGCC GAGGCGTTCG CCGTCGAACC GGCGACCATG GCGCAGCGGC TCGTACGGGC CAAGCGGCGT ATCCGCGACA CGGGTGTGCC ATTCACCCTG CCGGAACGTG ACGATCTGGC CGAGCGGCTG CCCGCCGTGC TCGAATCGGT CTACGGCGTC TATGCCATCG ACTGGCAGCG CGGCCCACCC GACGACCCGG GGGATTCGTT GGCCGCCGAG GCGTTGCACC TGACCGCCCT GCTGACCGAG TTGCTGCCCG CCGATCCGGA GGTGCTCGGC CTGGCCGCGC TGGTGTGTTT CGGCGAGGCG CGCCGCCCCG CGCGGCGTGG GGTCGAGGGC GCGTTCGTCG GCCTCGACGA TCAGGACAGT GCGCGGTGGG ACCACGAGTT GATCGCCCGG GCCGAGGATC TGCTGCGGCG CGCGCACACC CACCGGCGGC CGGGCCGGTT CCAGTACGAG GCGGCCATCC ACTCGGCACA CTGTCACCGC CCGGTGGATC GGCGGGCGCT GCGCAAGCTC TATCTGGCCC TGCTGCGGGT GGCGCCGTCA CTCGGTGCGG CGGTGGCGCT GGCGGCCCTC GACGGCGAGA TCGACGGGCC GGACGCCGGT CTGCGGGCAC TCGCGGCGAT CGATGACCCT GCGCTCGACC GGTTTCAACC GGCGTGGACC ACCCGCGCAC ACCTTCTCGA GCGCGCGGGC CGAACGGCCG AGGCAAATAT CGCCTACCAG CGGGCACTCG CGATCACCAG CAACCCCGCA CTGAGAGCGC ATCTACGGCA ACGCCTGCGG TGA
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Protein sequence | MLAALAAPTG DIAAAEDALA DAFERALRRW PVDGIPAEPA AWVITVARNR LRDRWRSAGH RRAARLDENL DVTAESVDWP AIPDKRLELM LVCAHPSVAV NVRTPLMLQV VMGVDAAAIA EAFAVEPATM AQRLVRAKRR IRDTGVPFTL PERDDLAERL PAVLESVYGV YAIDWQRGPP DDPGDSLAAE ALHLTALLTE LLPADPEVLG LAALVCFGEA RRPARRGVEG AFVGLDDQDS ARWDHELIAR AEDLLRRAHT HRRPGRFQYE AAIHSAHCHR PVDRRALRKL YLALLRVAPS LGAAVALAAL DGEIDGPDAG LRALAAIDDP ALDRFQPAWT TRAHLLERAG RTAEANIAYQ RALAITSNPA LRAHLRQRLR
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