| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3079 |
|---|
| Symbol | hisD |
|---|
| ID | 4878792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3218116 |
|---|
| End bp | 3219540 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640140379 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001071349 |
|---|
| Protein GI | 126435658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.141018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGTAT CGCCGGTGAC GATGGCCCGC ATCGACTTGC GCGGGAGGAC TCTGTCCACT
GCGCAGTTGC GGTCGGCGCT GCCGCGTGGC GGTGTCGACG TCGACGCCGT CGTGCCGAAG
GTCCGCCCGA TCGTCGAGGC CGTCGCCGAG CGCGGCGCCG AGGCCGCACT CGAATACGGC
GAGGCGTTCG ACGGGGTCCG TCCCGCGTCG GTGCGCGTGC CTGCCGAGCG GTTGGCGTCG
GCGCTGGCCG AACTCGATCC CGACGTCCGC GCGGCGCTGC AGGTCGCGAT CGACCGGGCC
CGCGCTGTAC ACGCCGACCA GCGACGCACC GACACCACGA CCACCCTGGC CCCCGGAGCG
ACCGTCACCG AACGCTGGGT GCCGCTCGAG CGGGTCGGGC TCTACGTACC GGGCGGCAAC
GCGGTCTACC CCTCGAGTGT GGTGATGAAC GTGGTGCCCG CCCAGACCGC GGGCGTCGAC
TCGCTGGTCA TCGCCAGCCC GCCGCAGGCC GACCACGGGG GACTGCCACA CCCGACCATC
CTGGCGGCCG CCGCGCTCCT CGGCGTCGAC GAGGTGTGGG CGGTCGGCGG CGCCCAGGCC
GTCGCGCTGC TGGCCTACGG CGGCACCGAT ATCGATGGCA CTGGGGCAAG CGGAGCGCCG
GGAGATGGCA CTGGGGCAAG CGGAGCGCCG GGAGATGGCA CTGGGGCAAG CGGAGCGCCG
GGAGATGTCA CCGAGCTCGC GCCGGTGGAC ATGATCACCG GCCCCGGCAA CATCTACGTC
ACCGCCGCCA AGCGGATCTG CCGCTCACAG GTCGGCATCG ACGCCGAGGC CGGGCCGACC
GAGATCGCGG TGCTGGCCGA CCACACCGCC GATCCGGTGC ACGTCGCGGC CGACCTGATC
AGCCAGGCCG AACACGACGA GATGGCCGCC AGCGTGCTGG TGACCACGAG CCCCGACCTG
GCCGACGCCA TCGATCGCGA ACTGCGGCGC CAGCTCGAGA CGACGGTGCA CCGCGAACGC
GTCAGCACGG CACTGACCGG TGAGCAGTCC GCGATCGTGC TCGTCGACGA CCTCGACGCC
GGGGTGCGGG TCGTGAACGC CTACGCCGCA GAACATCTCG AGATCCAGAC TGTCGACGCC
GCCGAGGTGG CCGGCCGGAT CCGTTCTGCC GGTGCGATCT TCGTCGGTCC GTACGCGCCG
GTCAGCCTCG GGGACTACTG CGCCGGGTCC AACCACGTGC TGCCGACGGC GGGGTGCGCC
CGCCACTCCA GCGGTCTGTC GGTGCAGACG TTCCTGCGCG GCATCCACGT CGTCGACTAC
ACCGAGGCGG CGCTCAAGGA CGTGTCGGGA TACGTGATCA CCCTGGCGCA GGCCGAGAAC
CTGCCCGCCC ACGGCGAAGC GGTGCGACGG AGGTTCGAGT CATGA
|
|---|
| Protein sequence | MNVSPVTMAR IDLRGRTLST AQLRSALPRG GVDVDAVVPK VRPIVEAVAE RGAEAALEYG
EAFDGVRPAS VRVPAERLAS ALAELDPDVR AALQVAIDRA RAVHADQRRT DTTTTLAPGA
TVTERWVPLE RVGLYVPGGN AVYPSSVVMN VVPAQTAGVD SLVIASPPQA DHGGLPHPTI
LAAAALLGVD EVWAVGGAQA VALLAYGGTD IDGTGASGAP GDGTGASGAP GDGTGASGAP
GDVTELAPVD MITGPGNIYV TAAKRICRSQ VGIDAEAGPT EIAVLADHTA DPVHVAADLI
SQAEHDEMAA SVLVTTSPDL ADAIDRELRR QLETTVHRER VSTALTGEQS AIVLVDDLDA
GVRVVNAYAA EHLEIQTVDA AEVAGRIRSA GAIFVGPYAP VSLGDYCAGS NHVLPTAGCA
RHSSGLSVQT FLRGIHVVDY TEAALKDVSG YVITLAQAEN LPAHGEAVRR RFES
|
|---|
| |